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  5. Mp1g19940.1

Mp1g19940.1 (ATATM1, ATM1)


Aliases : ATATM1, ATM1

Description : transport protein ATM of mitochondrial ISC system export machinery. subfamily ABCB transporter


Gene families : OG0002075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g19940.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Als_g28533 ATATM1, ATM1 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g00758 ATATM1, ATM1 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.26G039000.1 ATATM1, ATM1,... transport protein ATM of mitochondrial ISC system export... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000857.17 ATATM3, STA1, ATM3 Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021126.3 ATATM1, ATM1 ABC transporter B family member 24, mitochondrial... 0.03 OrthoFinder output from all 47 species
Cre13.g604150 ATATM3, STA1, ATM3 ABC transporter B family member 25, mitochondrial... 0.02 OrthoFinder output from all 47 species
Lfl_g16586 ATATM1, ATM1 subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g17300 ATATM3, STA1, ATM3 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Smo75404 ATATM1, ATM1 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 115 393
IPR003439 ABC_transporter-like_ATP-bd 457 604
No external refs found!