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Description : subunit zeta of cargo adaptor F-subcomplex
Gene families : OG0003673 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003673_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp1g05960.1 | |
| Cluster | HCCA: Cluster_26 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G08520 | No alias | SNARE-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g004247 | No alias | subunit zeta of cargo adaptor F-subcomplex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g031855 | No alias | subunit zeta of cargo adaptor F-subcomplex & original... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g02767 | No alias | subunit zeta of cargo adaptor F-subcomplex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g01485 | No alias | subunit zeta of cargo adaptor F-subcomplex & original... | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g01931 | No alias | subunit zeta of cargo adaptor F-subcomplex & original... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0007.g010675 | No alias | subunit zeta of cargo adaptor F-subcomplex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.25G075600.1 | Ceric.25G075600 | subunit zeta of cargo adaptor F-subcomplex & original... | 0.09 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020848.67 | No alias | Vesicle trafficking.Coat protein I (COPI) coatomer... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g06388 | No alias | subunit zeta of cargo adaptor F-subcomplex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g14889 | No alias | subunit zeta of cargo adaptor F-subcomplex & original... | 0.06 | OrthoFinder output from all 47 species | |
| Ehy_g21225 | No alias | subunit zeta of cargo adaptor F-subcomplex & original... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01016804001 | No alias | Vesicle trafficking.Coat protein I (COPI) coatomer... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01021391001 | No alias | Vesicle trafficking.Coat protein I (COPI) coatomer... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_26280 | No alias | subunit zeta of cargo adaptor F-subcomplex | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g21250.1 | LOC_Os02g21250 | subunit zeta of cargo adaptor F-subcomplex | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g38610.1 | LOC_Os05g38610 | subunit zeta of cargo adaptor F-subcomplex | 0.06 | OrthoFinder output from all 47 species | |
| Len_g58112 | No alias | subunit zeta of cargo adaptor F-subcomplex & original... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g00292 | No alias | subunit zeta of cargo adaptor F-subcomplex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g19235 | No alias | subunit zeta of cargo adaptor F-subcomplex & original... | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g00800 | No alias | subunit zeta of cargo adaptor F-subcomplex & original... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g02996 | No alias | subunit zeta of cargo adaptor F-subcomplex & original... | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c4_17280V3.1 | Pp3c4_17280 | SNARE-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Smo442701 | No alias | Vesicle trafficking.Coat protein I (COPI) coatomer... | 0.08 | OrthoFinder output from all 47 species | |
| Spa_g14691 | No alias | subunit zeta of cargo adaptor F-subcomplex & original... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g14692 | No alias | subunit zeta of cargo adaptor F-subcomplex & original... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g06378 | No alias | subunit zeta of cargo adaptor F-subcomplex & original... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e027247_P001 | Zm00001e027247 | subunit zeta of cargo adaptor F-subcomplex | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0003954 | NADH dehydrogenase activity | IEP | HCCA |
| MF | GO:0003955 | NAD(P)H dehydrogenase (quinone) activity | IEP | HCCA |
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005839 | proteasome core complex | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0008137 | NADH dehydrogenase (ubiquinone) activity | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0009056 | catabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| MF | GO:0015453 | oxidoreduction-driven active transmembrane transporter activity | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | HCCA |
| MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| CC | GO:0046540 | U4/U6 x U5 tri-snRNP complex | IEP | HCCA |
| MF | GO:0050136 | NADH dehydrogenase (quinone) activity | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | HCCA |
| CC | GO:0097526 | spliceosomal tri-snRNP complex | IEP | HCCA |
| CC | GO:0120114 | Sm-like protein family complex | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022775 | AP_mu_sigma_su | 8 | 149 |
| No external refs found! |