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  5. Zm00001e042370_P001

Zm00001e042370_P001 (RPL2.1, Zm00001e042370)


Aliases : RPL2.1, Zm00001e042370

Description : 50S ribosomal protein L2, chloroplastic OS=Sorghum bicolor (sp|a1e9w6|rk2_sorbi : 90.9)


Gene families : OG0002194 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002194_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e042370_P001

Target Alias Description ECC score Gene Family Method Actions
MA_7814449g0010 No alias 60S ribosomal protein L2, mitochondrial OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Mp1g19370.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g43250 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Smo137825 RPL2.1 Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Solyc00g500150.1.1 RPL2.1, Solyc00g500150 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.04 OrthoFinder output from all 47 species
Solyc05g023730.1.1 RPL2.1, Solyc05g023730 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR022669 Ribosomal_L2_C 24 95
No external refs found!