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  5. Zm00001e041436_P002

Zm00001e041436_P002 (RFC2, Zm00001e041436)


Aliases : RFC2, Zm00001e041436

Description : component RFC2 of PCNA sliding clamp loader complex


Gene families : OG0004921 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004921_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e041436_P002

Target Alias Description ECC score Gene Family Method Actions
AT1G63160 RFC2 replication factor C 2 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000042.30 RFC2 Cell cycle.interphase.DNA... 0.02 OrthoFinder output from all 47 species
Cre07.g337150 RFC2 Cell cycle.interphase.DNA... 0.03 OrthoFinder output from all 47 species
LOC_Os04g48060.1 RFC2, LOC_Os04g48060 component RFC2 of PCNA sliding clamp loader complex 0.04 OrthoFinder output from all 47 species
Lfl_g02825 RFC2 component *(RFC2) of PCNA sliding clamp loader complex &... 0.03 OrthoFinder output from all 47 species
Mp6g10670.1 RFC2 component RFC2 of PCNA sliding clamp loader complex 0.02 OrthoFinder output from all 47 species
Sam_g13133 No alias component *(RFC2) of PCNA sliding clamp loader complex &... 0.02 OrthoFinder output from all 47 species
Solyc08g080510.4.1 RFC2, Solyc08g080510 component RFC2 of PCNA sliding clamp loader complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 49 167
IPR013748 Rep_factorC_C 235 320
No external refs found!