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  5. Zm00001e040632_P001

Zm00001e040632_P001 (Zm00001e040632)


Aliases : Zm00001e040632

Description : no description available(sp|q680b7|xyn4_arath : 318.0)


Gene families : OG0001478 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001478_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e040632_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00160040 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G58370 ATXYN1, RXF12 glycosyl hydrolase family 10 protein /... 0.04 OrthoFinder output from all 47 species
AT2G14690 No alias Glycosyl hydrolase superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G08160 No alias glycosyl hydrolase family 10 protein /... 0.03 OrthoFinder output from all 47 species
Adi_g007681 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25978 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10327 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene04570.t1 Aspi01Gene04570 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08622.t1 Aspi01Gene08622 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.30G036100.1 Ceric.30G036100 not classified & original description: pacid=50608372... 0.04 OrthoFinder output from all 47 species
Dde_g37891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01037833001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os01g04290.1 LOC_Os01g04290 endo-beta-1,4-xylanase 0.04 OrthoFinder output from all 47 species
LOC_Os01g04300.1 ATXYN1, RXF12,... endo-beta-1,4-xylanase 0.02 OrthoFinder output from all 47 species
LOC_Os03g10440.1 LOC_Os03g10440 no description available(sp|a0a1p8b8f8|xyn5_arath : 380.0) 0.06 OrthoFinder output from all 47 species
LOC_Os03g10469.1 LOC_Os03g10469 no description available(sp|q680b7|xyn4_arath : 358.0) 0.02 OrthoFinder output from all 47 species
LOC_Os03g10478.1 LOC_Os03g10478 no description available(sp|q84wt5|xyn5l_arath : 394.0) 0.03 OrthoFinder output from all 47 species
LOC_Os03g14010.1 LOC_Os03g14010 no description available(sp|q84wt5|xyn5l_arath : 305.0) 0.03 OrthoFinder output from all 47 species
LOC_Os03g47010.1 ATXYN1, RXF12,... endo-beta-1,4-xylanase 0.02 OrthoFinder output from all 47 species
LOC_Os05g23350.1 LOC_Os05g23350 endo-beta-1,4-xylanase 0.02 OrthoFinder output from all 47 species
LOC_Os05g23924.1 LOC_Os05g23924 no description available(sp|q84wt5|xyn5l_arath : 299.0) 0.03 OrthoFinder output from all 47 species
LOC_Os05g25560.1 LOC_Os05g25560 endo-beta-1,4-xylanase 0.02 OrthoFinder output from all 47 species
LOC_Os10g21110.1 LOC_Os10g21110 no description available(sp|q680b7|xyn4_arath : 358.0) 0.03 OrthoFinder output from all 47 species
Ore_g27615 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g27748 ATXYN1, RXF12 endo-beta-1,4-xylanase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006025 No alias not classified & original description: CDS=1-2073 0.03 OrthoFinder output from all 47 species
Sam_g09327 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g27477 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000757_P001 Zm00001e000757 no description available(sp|q84wt5|xyn5l_arath : 397.0) 0.02 OrthoFinder output from all 47 species
Zm00001e002760_P001 Zm00001e002760 no description available(sp|q680b7|xyn4_arath : 360.0) 0.03 OrthoFinder output from all 47 species
Zm00001e016992_P001 ATXYN1, RXF12,... endo-beta-1,4-xylanase 0.04 OrthoFinder output from all 47 species
Zm00001e038773_P006 Zm00001e038773 no description available(sp|q84wt5|xyn5l_arath : 388.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001000 GH10_dom 222 484
No external refs found!