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Aliases : Zm00001e039986
Description : KH domain-containing protein At4g18375 OS=Arabidopsis thaliana (sp|p58223|y4837_arath : 399.0)
Gene families : OG0000185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000185_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00010p00265700 | evm_27.TU.AmTr_v1... | RNA-binding KH domain-containing protein RCF3... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00033p00116200 | evm_27.TU.AmTr_v1... | KH domain-containing protein HEN4 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| AT5G15270 | No alias | RNA-binding KH domain-containing protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g006607 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g008962 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g016415 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g017897 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g022420 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g074054 | HEN4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g075813 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g075983 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g096226 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g108369 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g117114 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g09715 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g05589 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g19267 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g04404 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g04253 | No alias | regulatory protein *(RCF3) of HYL1-phosphorylation &... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g29218 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g62599 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0194.g057204 | No alias | regulatory protein *(RCF3) of HYL1-phosphorylation &... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g07160 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g07339 | HEN4 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g12254 | No alias | regulatory protein *(RCF3) of HYL1-phosphorylation &... | 0.06 | OrthoFinder output from all 47 species | |
| Cba_g24288 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g71670 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.24G065400.1 | Ceric.24G065400 | not classified & original description: pacid=50629874... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.32G028300.1 | Ceric.32G028300 | not classified & original description: pacid=50598029... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.32G061200.1 | Ceric.32G061200 | not classified & original description: pacid=50597564... | 0.06 | OrthoFinder output from all 47 species | |
| Dac_g02274 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g05129 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g09565 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g10791 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g12897 | No alias | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Dcu_g24061 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g01553 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g06841 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g07829 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01009261001 | No alias | RNA-binding KH domain-containing protein RCF3... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01011439001 | No alias | RNA-binding KH domain-containing protein RCF3... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01021523001 | No alias | KH domain-containing protein At4g18375 OS=Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01031037001 | No alias | KH domain-containing protein At4g18375 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01038571001 | No alias | RNA-binding KH domain-containing protein RCF3... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_18830 | No alias | RNA-binding KH domain-containing protein RCF3... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_31686 | No alias | RNA-binding KH domain-containing protein RCF3... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os06g23460.1 | LOC_Os06g23460 | RNA-binding KH domain-containing protein RCF3... | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os09g32300.1 | LOC_Os09g32300 | KH domain-containing protein HEN4 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g02093 | No alias | regulatory protein *(RCF3) of HYL1-phosphorylation &... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g10062 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_108374g0010 | No alias | KH domain-containing protein HEN4 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| MA_12604g0010 | No alias | RNA-binding KH domain-containing protein RCF3... | 0.04 | OrthoFinder output from all 47 species | |
| MA_3715g0020 | No alias | RNA-binding KH domain-containing protein RCF3... | 0.03 | OrthoFinder output from all 47 species | |
| MA_6622g0010 | No alias | KH domain-containing protein At4g18375 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g32267 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g03216 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g03833 | No alias | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Ore_g06520 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g06772 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g07144 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g09995 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g10011 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g10012 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g18548 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g21684 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g25271 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g40850 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g37389 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g06476 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g01057 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0026.g009457 | No alias | not classified & original description: CDS=528-2219 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g12504 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g35222 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g106020.3.1 | HEN4, Solyc01g106020 | RNA-binding KH domain-containing protein RCF3... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g067210.3.1 | Solyc02g067210 | KH domain-containing protein At4g18375 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc03g034200.3.1 | Solyc03g034200 | RNA-binding KH domain-containing protein RCF3... | 0.08 | OrthoFinder output from all 47 species | |
| Solyc04g077060.3.1 | Solyc04g077060 | RNA-binding KH domain-containing protein RCF3... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc05g007810.3.1 | Solyc05g007810 | RNA-binding KH domain-containing protein RCF3... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g048500.3.1 | Solyc08g048500 | KH domain-containing protein At4g18375 OS=Arabidopsis... | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g22547 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g26299 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g39448 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g02804 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g07199 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| MF | GO:0005049 | nuclear export signal receptor activity | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0017069 | snRNA binding | IEP | HCCA |
| MF | GO:0017070 | U6 snRNA binding | IEP | HCCA |
| MF | GO:0030623 | U5 snRNA binding | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0140104 | molecular carrier activity | IEP | HCCA |
| MF | GO:0140142 | nucleocytoplasmic carrier activity | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| No external refs found! |