Zm00001e039528_P002 (WRKY54, ATWRKY54,...)

Aliases : WRKY54, ATWRKY54, Zm00001e039528

Description : transcription factor (WRKY)

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e039528_P002

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00015p00228580	WRKY53,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AMTR_s00015p00229650	WRKY53,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AT4G18170	WRKY28, ATWRKY28	WRKY DNA-binding protein 28	0.02	OrthoFinder output from all 47 species
AT5G49520	WRKY48, ATWRKY48	WRKY DNA-binding protein 48	0.02	OrthoFinder output from all 47 species
Adi_g006856	WRKY75, ATWRKY75	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g029222	WRKY75, ATWRKY75	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Adi_g041253	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g096489	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g117328	WRKY3	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g117329	WRKY3	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g04786	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g32350	WRKY75, ATWRKY75	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g47915	WRKY43, ATWRKY43	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g05188	ATWRKY50, WRKY50	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g13841	WRKY55, ATWRKY55	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g39367	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g20678	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.08	OrthoFinder output from all 47 species
Aob_g14799	WRKY43, ATWRKY43	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g15552	WRKY8, ATWRKY8	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g19921	WRKY75, ATWRKY75	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Aop_g61053	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene65392.t1	WRKY43,...	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g02867	WRKY43, ATWRKY43	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Cba_g67458	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.08	OrthoFinder output from all 47 species
Ceric.13G048500.1	Ceric.13G048500	not classified & original description: pacid=50636587...	0.03	OrthoFinder output from all 47 species
Dac_g08284	WRKY26	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g09789	WRKY75, ATWRKY75	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g20453	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g02916	WRKY53, ATWRKY53	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Dcu_g06370	ATWRKY57, WRKY57	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Dde_g11761	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Dde_g18753	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Dde_g20945	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g24941	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g28500	ATWRKY40, WRKY40	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g46794	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g03251	ATWRKY57, WRKY57	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g03867	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g06101	WRKY53, ATWRKY53	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g09114	WRKY33, ATWRKY33	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g10883	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g27429	WRKY72, ATWRKY72	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g29785	WRKY56, ATWRKY56	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01007006001	AtWRKY20, WRKY20	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
GSVIVT01008046001	WRKY72, ATWRKY72	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01012196001	ATWRKY57, WRKY57	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01021397001	WRKY28, ATWRKY28	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
GSVIVT01033194001	ATWRKY51, WRKY51	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01035426001	ATWRKY50, WRKY50	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
Gb_00544	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Gb_00545	WRKY53, ATWRKY53	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Gb_08731	ATWRKY57, WRKY57	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Gb_39366	WRKY31, ATWRKY31	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os01g53260.1	ATWRKY24,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os05g25770.1	WRKY55,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
LOC_Os05g40080.1	WRKY54,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os05g49620.1	WRKY53,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
LOC_Os07g02060.1	ATWRKY57,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os09g16510.1	WRKY46,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os09g25060.1	ATWRKY40,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os09g25070.1	ATWRKY40,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Len_g29683	WRKY56, ATWRKY56	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
MA_11072g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_120697g0010	ATWRKY71, WRKY71	transcription factor (WRKY)	0.01	OrthoFinder output from all 47 species
MA_179641g0010	ATWRKY71, WRKY71	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
MA_496691g0010	ATWRKY59, WRKY59	transcription factor (WRKY)	0.05	OrthoFinder output from all 47 species
MA_83250g0010	WRKY6, ATWRKY6	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Mp5g05560.1	WRKY6, ATWRKY6	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Msp_g19074	ATWRKY51, WRKY51	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Msp_g29717	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Msp_g32580	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g35939	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Msp_g44438	WRKY43, ATWRKY43	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g09924	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Pir_g15307	ATWRKY57, WRKY57	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g58577	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006969	WRKY6, ATWRKY6	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Sam_g09440	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g10405	No alias	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Sam_g26717	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Smo81371	WRKY9, ATWRKY9	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
Solyc02g080890.3.1	WRKY6, ATWRKY6,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc02g088340.4.1	WRKY3, Solyc02g088340	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc04g051690.4.1	ATWRKY51,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc04g072070.3.1	ATWRKY51,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc06g048870.3.1	WRKY55,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc08g067340.4.1	ATWRKY40,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc08g067360.3.1	ATWRKY40,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Solyc10g009550.3.1	ATWRKY30,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc12g056745.1.1	ATWRKY51,...	transcription factor (WRKY)	0.07	OrthoFinder output from all 47 species
Spa_g16728	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g38166	WRKY43, ATWRKY43	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e001512_P003	WRKY55,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Zm00001e005732_P002	ATWRKY57,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e019977_P001	ATWRKY51,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e027989_P001	WRKY53,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e036450_P001	WRKY53,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0002831	regulation of response to biotic stimulus	IEP	HCCA
BP	GO:0010112	regulation of systemic acquired resistance	IEP	HCCA
BP	GO:0031347	regulation of defense response	IEP	HCCA
BP	GO:0032101	regulation of response to external stimulus	IEP	HCCA
BP	GO:0048583	regulation of response to stimulus	IEP	HCCA
BP	GO:0080134	regulation of response to stress	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	230	272

External Links

No external refs found!

Zm00001e039528_P002 (WRKY54, ATWRKY54,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation