1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e039017_P003

Zm00001e039017_P003 (Zm00001e039017)


Aliases : Zm00001e039017

Description : no hits & (original description: none)


Gene families : OG0003321 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003321_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e039017_P003

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00086p00132870 evm_27.TU.AmTr_v1... No description available 0.1 OrthoFinder output from all 47 species
AT3G47890 No alias Ubiquitin carboxyl-terminal hydrolase-related protein 0.09 OrthoFinder output from all 47 species
AT3G47910 No alias Ubiquitin carboxyl-terminal hydrolase-related protein 0.1 OrthoFinder output from all 47 species
Adi_g058350 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g080721 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g14795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04590 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06801 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18753 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19280 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g22460 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14015 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene43347.t1 Aspi01Gene43347 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0327.g065237 No alias not classified & original description: CDS=1-5397 0.05 OrthoFinder output from all 47 species
Ceric.1Z194000.1 Ceric.1Z194000 not classified & original description: pacid=50618972... 0.05 OrthoFinder output from all 47 species
Cre12.g508250 No alias No description available 0.05 OrthoFinder output from all 47 species
Dac_g28933 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g04153 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g07008 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g16619 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008079001 No alias No description available 0.09 OrthoFinder output from all 47 species
LOC_Os03g06950.1 LOC_Os03g06950 no hits & (original description: none) 0.13 OrthoFinder output from all 47 species
Len_g49533 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g12618 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
MA_46922g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g13542 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05015 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44266 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g13760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008734 No alias not classified & original description: CDS=269-5383 0.03 OrthoFinder output from all 47 species
Sam_g24494 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g071120.3.1 Solyc06g071120 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Spa_g14539 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g25851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02198 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016579 protein deubiquitination IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006866 DUF627_N 44 153
IPR001394 Peptidase_C19_UCH 1167 1471
IPR006865 DUF629 318 808
No external refs found!