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  5. Zm00001e038976_P001

Zm00001e038976_P001 (CKS1AT, CKS1, Zm00001e038976)


Aliases : CKS1AT, CKS1, Zm00001e038976

Description : scaffolding component CKS of cyclin-dependent kinase complex


Gene families : OG0002701 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002701_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e038976_P001
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
Aop_g22173 CKS2 scaffold component *(CKS) of cyclin-dependent kinase... 0.02 OrthoFinder output from all 47 species
Ceric.02G054300.1 CKS1AT, CKS1,... scaffold component *(CKS) of cyclin-dependent kinase... 0.07 OrthoFinder output from all 47 species
Ceric.20G054400.1 CKS1AT, CKS1,... scaffold component *(CKS) of cyclin-dependent kinase... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000944.39 CKS1AT, CKS1 Cell cycle.regulation.cyclin-dependent kinase... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020780.5 No alias Cell cycle.regulation.cyclin-dependent kinase... 0.02 OrthoFinder output from all 47 species
Cre03.g180350 No alias Cell cycle.regulation.cyclin-dependent kinase... 0.02 OrthoFinder output from all 47 species
Dde_g49889 CKS2 scaffold component *(CKS) of cyclin-dependent kinase... 0.03 OrthoFinder output from all 47 species
Gb_39695 CKS1AT, CKS1 scaffolding component CKS of cyclin-dependent kinase complex 0.02 OrthoFinder output from all 47 species
Len_g41049 CKS1AT, CKS1 scaffold component *(CKS) of cyclin-dependent kinase... 0.02 OrthoFinder output from all 47 species
Lfl_g40067 CKS1AT, CKS1 scaffold component *(CKS) of cyclin-dependent kinase... 0.02 OrthoFinder output from all 47 species
Nbi_g23237 CKS1AT, CKS1 scaffold component *(CKS) of cyclin-dependent kinase... 0.03 OrthoFinder output from all 47 species
Pp3c2_6200V3.1 Pp3c2_6200 CDK-subunit 2 0.01 OrthoFinder output from all 47 species
Spa_g48395 CKS1AT, CKS1 scaffold component *(CKS) of cyclin-dependent kinase... 0.02 OrthoFinder output from all 47 species
Tin_g18395 CKS1AT, CKS1 scaffold component *(CKS) of cyclin-dependent kinase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0007088 regulation of mitotic nuclear division IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0010965 regulation of mitotic sister chromatid separation IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0033045 regulation of sister chromatid segregation IEP HCCA
BP GO:0033047 regulation of mitotic sister chromatid segregation IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0051783 regulation of nuclear division IEP HCCA
BP GO:0051983 regulation of chromosome segregation IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0090231 regulation of spindle checkpoint IEP HCCA
BP GO:0090266 regulation of mitotic cell cycle spindle assembly checkpoint IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901976 regulation of cell cycle checkpoint IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
BP GO:1903504 regulation of mitotic spindle checkpoint IEP HCCA
BP GO:1905818 regulation of chromosome separation IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000789 Cyclin-dep_kinase_reg-sub 4 70
No external refs found!