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  5. Zm00001e038772_P001

Zm00001e038772_P001 (Zm00001e038772)


Aliases : Zm00001e038772

Description : no description available(sp|q84wt5|xyn5l_arath : 392.0)


Gene families : OG0001478 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001478_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e038772_P001
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00086p00056140 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G58370 ATXYN1, RXF12 glycosyl hydrolase family 10 protein /... 0.03 OrthoFinder output from all 47 species
AT4G08160 No alias glycosyl hydrolase family 10 protein /... 0.03 OrthoFinder output from all 47 species
AT4G33810 No alias Glycosyl hydrolase superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G33820 No alias Glycosyl hydrolase superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g007681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036837 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g086595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.30G035800.1 Ceric.30G035800 not classified & original description: pacid=50607993... 0.03 OrthoFinder output from all 47 species
Ceric.30G036100.1 Ceric.30G036100 not classified & original description: pacid=50608372... 0.02 OrthoFinder output from all 47 species
Dde_g13207 ATXYN1, RXF12 endo-beta-1,4-xylanase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01037825001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01037833001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_02219 No alias no description available(sp|q84wt5|xyn5l_arath : 355.0) 0.03 OrthoFinder output from all 47 species
LOC_Os01g04290.1 LOC_Os01g04290 endo-beta-1,4-xylanase 0.02 OrthoFinder output from all 47 species
LOC_Os01g04300.1 ATXYN1, RXF12,... endo-beta-1,4-xylanase 0.03 OrthoFinder output from all 47 species
LOC_Os03g10440.1 LOC_Os03g10440 no description available(sp|a0a1p8b8f8|xyn5_arath : 380.0) 0.03 OrthoFinder output from all 47 species
LOC_Os03g10478.1 LOC_Os03g10478 no description available(sp|q84wt5|xyn5l_arath : 394.0) 0.04 OrthoFinder output from all 47 species
LOC_Os05g25560.1 LOC_Os05g25560 endo-beta-1,4-xylanase 0.02 OrthoFinder output from all 47 species
Sam_g09327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016992_P001 ATXYN1, RXF12,... endo-beta-1,4-xylanase 0.06 OrthoFinder output from all 47 species
Zm00001e016997_P001 Zm00001e016997 endo-beta-1,4-xylanase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004451 isocitrate lyase activity IEP HCCA
MF GO:0004474 malate synthase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006097 glyoxylate cycle IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016833 oxo-acid-lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046487 glyoxylate metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR003305 CenC_carb-bd 50 168
IPR001000 GH10_dom 226 487
No external refs found!