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  5. Zm00001e038628_P001

Zm00001e038628_P001 (GAD, GAD1, Zm00001e038628)


Aliases : GAD, GAD1, Zm00001e038628

Description : Glutamate decarboxylase 1 OS=Arabidopsis thaliana (sp|q42521|dce1_arath : 332.0)


Gene families : OG0000690 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000690_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e038628_P001
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00142920 GAD, GAD1,... Amino acid metabolism.biosynthesis.glutamate... 0.06 OrthoFinder output from all 47 species
AMTR_s00024p00151670 GAD, GAD1,... Amino acid metabolism.biosynthesis.glutamate... 0.06 OrthoFinder output from all 47 species
Ala_g03790 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69537.t1 GAD, GAD1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.17G022200.1 GAD, GAD1,... glutamate decarboxylase *(GAD) & original description:... 0.03 OrthoFinder output from all 47 species
GSVIVT01011565001 GAD, GAD1 Amino acid metabolism.biosynthesis.glutamate... 0.07 OrthoFinder output from all 47 species
LOC_Os03g13300.1 GAD, GAD1, LOC_Os03g13300 glutamate decarboxylase 0.06 OrthoFinder output from all 47 species
LOC_Os03g51080.1 GAD, GAD1, LOC_Os03g51080 glutamate decarboxylase 0.02 OrthoFinder output from all 47 species
LOC_Os05g34840.1 GAD, GAD1, LOC_Os05g34840 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10428419g0010 GAD, GAD1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_89828g0010 GAD, GAD1 glutamate decarboxylase 0.02 OrthoFinder output from all 47 species
Nbi_g07461 GAD2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g61216 GAD, GAD1 glutamate decarboxylase *(GAD) & original description: none 0.02 OrthoFinder output from all 47 species
Smo164618 GAD, GAD1 Amino acid metabolism.biosynthesis.glutamate... 0.04 OrthoFinder output from all 47 species
Spa_g12090 GAD4 glutamate decarboxylase *(GAD) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016831 carboxy-lyase activity IEA Interproscan
BP GO:0019752 carboxylic acid metabolic process IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002129 PyrdxlP-dep_de-COase 33 165
No external refs found!