Zm00001e038558_P003 (TPR1, Zm00001e038558)


Aliases : TPR1, Zm00001e038558

Description : transcriptional repressor (TPL). transcriptional co-repressor (TPL/TPR)


Gene families : OG0000427 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000427_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e038558_P003

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00159380 TPL, WSIP1,... RNA biosynthesis.transcriptional repression.TPL/TPR... 0.03 OrthoFinder output from all 47 species
AT1G15750 TPL, WSIP1 Transducin family protein / WD-40 repeat family protein 0.05 OrthoFinder output from all 47 species
AT1G80490 TPR1 TOPLESS-related 1 0.03 OrthoFinder output from all 47 species
AT3G15880 WSIP2, TPR4 WUS-interacting protein 2 0.04 OrthoFinder output from all 47 species
AT3G16830 TPR2 TOPLESS-related 2 0.09 OrthoFinder output from all 47 species
Adi_g003873 TPR1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Adi_g012443 TPL, WSIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g053090 WSIP2, TPR4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056043 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Adi_g117102 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Aev_g05875 TPL, WSIP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06729 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Ala_g18277 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.05 OrthoFinder output from all 47 species
Als_g16532 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Als_g21344 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Als_g26654 TPR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g27970 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.11 OrthoFinder output from all 47 species
Aob_g17933 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Aob_g27611 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene10282.t1 TPR1, Aspi01Gene10282 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45821.t1 TPL, WSIP1,... transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene54212.t1 TPL, WSIP1,... transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0207.g057893 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Cba_g14097 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Cba_g61193 TPR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g61200 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Ceric.07G013800.1 TPL, WSIP1,... transcriptional co-repressor *(TPL/TPR) & original... 0.09 OrthoFinder output from all 47 species
Ceric.14G074400.1 TPL, WSIP1,... transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Dac_g14665 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Dac_g20506 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g19733 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Dde_g03492 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g07917 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g08671 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g25643 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01015571001 WSIP2, TPR4 RNA biosynthesis.transcriptional repression.TPL/TPR... 0.06 OrthoFinder output from all 47 species
GSVIVT01017343001 WSIP2, TPR4 RNA biosynthesis.transcriptional repression.TPL/TPR... 0.04 OrthoFinder output from all 47 species
GSVIVT01024440001 TPL, WSIP1 RNA biosynthesis.transcriptional repression.TPL/TPR... 0.04 OrthoFinder output from all 47 species
GSVIVT01031186001 TPR3 RNA biosynthesis.transcriptional repression.TPL/TPR... 0.02 OrthoFinder output from all 47 species
Gb_04053 TPL, WSIP1 transcriptional repressor (TPL). transcriptional... 0.02 OrthoFinder output from all 47 species
Gb_32130 TPL, WSIP1 transcriptional repressor (TPL). transcriptional... 0.06 OrthoFinder output from all 47 species
Gb_37153 TPL, WSIP1 transcriptional repressor (TPL). transcriptional... 0.06 OrthoFinder output from all 47 species
LOC_Os03g14980.1 TPR1, LOC_Os03g14980 transcriptional repressor (TPL). transcriptional... 0.14 OrthoFinder output from all 47 species
Len_g10333 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g40403 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.07 OrthoFinder output from all 47 species
MA_10430083g0010 TPL, WSIP1 transcriptional repressor (TPL). transcriptional... 0.09 OrthoFinder output from all 47 species
MA_16979g0010 TPL, WSIP1 Protein TPR3 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
MA_16979g0020 TPL, WSIP1 Topless-related protein 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_8901047g0010 TPR2 Topless-related protein 2 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
MA_98943g0010 TPR2 Protein TPR1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Mp7g17410.1 TPR1 transcriptional repressor (TPL). transcriptional... 0.03 OrthoFinder output from all 47 species
Msp_g15450 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Msp_g32244 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Ore_g17223 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Ore_g35084 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Ppi_g03281 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g29475 TPR1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g29476 TPL, WSIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004827 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0099.g019559 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Sam_g16347 No alias transcriptional co-repressor *(TPL/TPR) & original... 0.05 OrthoFinder output from all 47 species
Sam_g26704 No alias transcriptional co-repressor *(TPL/TPR) & original... 0.04 OrthoFinder output from all 47 species
Solyc03g116750.3.1 WSIP2, TPR4,... transcriptional repressor (TPL). transcriptional... 0.02 OrthoFinder output from all 47 species
Solyc08g076030.3.1 TPL, WSIP1,... transcriptional repressor (TPL). transcriptional... 0.05 OrthoFinder output from all 47 species
Tin_g06694 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019902 phosphatase binding IEP HCCA
MF GO:0019903 protein phosphatase binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 454 487
IPR001680 WD40_repeat 914 947
No external refs found!