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  5. Zm00001e038313_P002

Zm00001e038313_P002 (QQT2, Zm00001e038313)


Aliases : QQT2, Zm00001e038313

Description : GPN1 RNA polymerase-II nuclear import factor


Gene families : OG0005811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005811_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e038313_P002
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
Aop_g26339 QQT2 RNA polymerase-II nuclear import factor *(GPN1) &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020614.99 QQT2 RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... 0.02 OrthoFinder output from all 47 species
GSVIVT01034965001 QQT2 RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... 0.04 OrthoFinder output from all 47 species
MA_102653g0010 QQT2 GPN-loop GTPase QQT2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_117463g0010 QQT2 GPN-loop GTPase QQT2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Sam_g17832 No alias RNA polymerase-II nuclear import factor *(GPN1) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR004130 Gpn 65 303
No external refs found!