Zm00001e037244_P001 (AT-HSFC1, HSFC1,...)

Aliases : AT-HSFC1, HSFC1, Zm00001e037244

Description : transcription factor (HSF)

Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e037244_P001

Target	Alias	Description	ECC score	Gene Family Method
AT1G32330	ATHSFA1D, HSFA1D	heat shock transcription factor A1D	0.04	OrthoFinder output from all 47 species
AT2G41690	AT-HSFB3, HSFB3	heat shock transcription factor B3	0.04	OrthoFinder output from all 47 species
AT3G24520	AT-HSFC1, HSFC1	heat shock transcription factor C1	0.05	OrthoFinder output from all 47 species
Aob_g08951	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0013.g013257	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: CDS=1-1296	0.03	OrthoFinder output from all 47 species
Dac_g22001	AT-HSFA6B, HSFA6B	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g03864	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g19849	AT-HSFA6B, HSFA6B	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g26939	HSFA1E, ATHSFA1E	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g35911	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
GSVIVT01010595001	AT-HSFB2A, HSFB2A	RNA biosynthesis.transcriptional activation.HSF (heat...	0.04	OrthoFinder output from all 47 species
GSVIVT01018041001	AT-HSFA6B, HSFA6B	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	OrthoFinder output from all 47 species
GSVIVT01033781001	HSFA3, AT-HSFA3	RNA biosynthesis.transcriptional activation.HSF (heat...	0.04	OrthoFinder output from all 47 species
LOC_Os03g06630.1	AT-HSFA6B,...	transcription factor (HSF)	0.04	OrthoFinder output from all 47 species
LOC_Os04g48030.1	AT-HSFB2B,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
Mp4g12230.1	HSFB4, SCZ, AT-HSFB4	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0224.g026285	ATHSF1, HSF1,...	HSF-type transcription factor & original description: CDS=1-2472	0.03	OrthoFinder output from all 47 species
Spa_g55869	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e027464_P001	HSF A4A,...	transcription factor (HSF)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
CC	GO:0018995	host cellular component	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	13	102

External Links

No external refs found!

Zm00001e037244_P001 (AT-HSFC1, HSFC1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation