Zm00001e036497_P001 (NFA02, NFA2, NAP1;2,...)

Aliases : NFA02, NFA2, NAP1;2, Zm00001e036497

Description : histone chaperone (NAP)

Gene families : OG0000784 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000784_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e036497_P001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00247340	NFA03, NFA3,...	Chromatin organisation.histone chaperone...	0.06	OrthoFinder output from all 47 species
AT4G26110	ATNAP1;1, NAP1;1	nucleosome assembly protein1;1	0.04	OrthoFinder output from all 47 species
Adi_g060774	NFA02, NFA2, NAP1;2	histone chaperone *(NAP) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g102779	NFA02, NFA2, NAP1;2	histone chaperone *(NAP) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g08239	NFA03, NFA3, NAP1;3	histone chaperone *(NAP) & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g03234	NFA03, NFA3, NAP1;3	histone chaperone *(NAP) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g13959	NFA03, NFA3, NAP1;3	histone chaperone *(NAP) & original description: none	0.05	OrthoFinder output from all 47 species
Azfi_s0018.g014775	ATNAP1;1, NAP1;1	histone chaperone *(NAP) & original description: CDS=127-1098	0.03	OrthoFinder output from all 47 species
Ceric.32G047400.1	NFA02, NFA2,...	histone chaperone *(NAP) & original description:...	0.02	OrthoFinder output from all 47 species
Dac_g11381	NFA03, NFA3, NAP1;3	histone chaperone *(NAP) & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os06g05660.1	NFA02, NFA2,...	histone chaperone (NAP)	0.08	OrthoFinder output from all 47 species
Len_g14932	ATNAP1;1, NAP1;1	histone chaperone *(NAP) & original description: none	0.02	OrthoFinder output from all 47 species
MA_19651g0010	NFA03, NFA3, NAP1;3	histone chaperone (NAP)	0.03	OrthoFinder output from all 47 species
Ore_g35087	NFA03, NFA3, NAP1;3	histone chaperone *(NAP) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g07098	NFA03, NFA3, NAP1;3	histone chaperone *(NAP) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g11239	NFA03, NFA3, NAP1;3	histone chaperone *(NAP) & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g07427	NFA03, NFA3, NAP1;3	histone chaperone *(NAP) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g07667	No alias	histone chaperone *(NAP) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc06g062680.3.1	PAB2, PABP2,...	histone chaperone (NAP). mRNA poly-A-tail binding factor (PABP)	0.02	OrthoFinder output from all 47 species
Spa_g41321	NFA03, NFA3, NAP1;3	histone chaperone *(NAP) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g56275	NFA03, NFA3, NAP1;3	histone chaperone *(NAP) & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g27243	NFA03, NFA3, NAP1;3	histone chaperone *(NAP) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g43616	NFA03, NFA3, NAP1;3	histone chaperone *(NAP) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e030011_P002	NFA02, NFA2,...	histone chaperone (NAP)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006334	nucleosome assembly	IEA	Interproscan
BP	GO:0006338	chromatin remodeling	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0034728	nucleosome organization	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065004	protein-DNA complex assembly	None	Extended
BP	GO:0071824	protein-DNA complex subunit organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003682	chromatin binding	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
BP	GO:0009892	negative regulation of metabolic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010629	negative regulation of gene expression	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	HCCA
BP	GO:0031047	RNA-mediated gene silencing	IEP	HCCA
MF	GO:0031491	nucleosome binding	IEP	HCCA
BP	GO:0042254	ribosome biogenesis	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
MF	GO:0044877	protein-containing complex binding	IEP	HCCA
BP	GO:0048519	negative regulation of biological process	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002164	NAP_family	60	305

External Links

No external refs found!

Zm00001e036497_P001 (NFA02, NFA2, NAP1;2,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation