Zm00001e036450_P001 (WRKY53, ATWRKY53,...)

Aliases : WRKY53, ATWRKY53, Zm00001e036450

Description : transcription factor (WRKY)

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e036450_P001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00015p00229650	WRKY53,...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
AMTR_s00088p00164440	AtWRKY20,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AT1G66550	WRKY67, ATWRKY67	WRKY DNA-binding protein 67	0.02	OrthoFinder output from all 47 species
AT2G25000	ATWRKY60, WRKY60	WRKY DNA-binding protein 60	0.04	OrthoFinder output from all 47 species
AT2G40750	WRKY54, ATWRKY54	WRKY DNA-binding protein 54	0.02	OrthoFinder output from all 47 species
AT2G47260	WRKY23, ATWRKY23	WRKY DNA-binding protein 23	0.02	OrthoFinder output from all 47 species
AT3G56400	ATWRKY70, WRKY70	WRKY DNA-binding protein 70	0.03	OrthoFinder output from all 47 species
AT4G18170	WRKY28, ATWRKY28	WRKY DNA-binding protein 28	0.02	OrthoFinder output from all 47 species
AT4G23810	WRKY53, ATWRKY53	WRKY family transcription factor	0.02	OrthoFinder output from all 47 species
AT5G01900	WRKY62, ATWRKY62	WRKY DNA-binding protein 62	0.04	OrthoFinder output from all 47 species
AT5G22570	WRKY38, ATWRKY38	WRKY DNA-binding protein 38	0.04	OrthoFinder output from all 47 species
AT5G24110	ATWRKY30, WRKY30	WRKY DNA-binding protein 30	0.02	OrthoFinder output from all 47 species
AT5G26170	ATWRKY50, WRKY50	WRKY DNA-binding protein 50	0.03	OrthoFinder output from all 47 species
AT5G46350	WRKY8, ATWRKY8	WRKY DNA-binding protein 8	0.03	OrthoFinder output from all 47 species
AT5G64810	ATWRKY51, WRKY51	WRKY DNA-binding protein 51	0.04	OrthoFinder output from all 47 species
Als_g07786	ATWRKY58, WRKY58	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g20678	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g33393	WRKY53, ATWRKY53	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.04G004800.1	ATWRKY71,...	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Dde_g20945	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g28500	ATWRKY40, WRKY40	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01008046001	WRKY72, ATWRKY72	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01019511001	WRKY53, ATWRKY53	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
GSVIVT01030258001	WRKY33, ATWRKY33	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
GSVIVT01035426001	ATWRKY50, WRKY50	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01035885001	ATWRKY40, WRKY40	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
Gb_08731	ATWRKY57, WRKY57	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Gb_23334	WRKY31, ATWRKY31	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os01g14440.1	WRKY6, ATWRKY6,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os01g61080.1	WRKY33,...	transcription factor (WRKY). transcription factor (WRKY33)	0.03	OrthoFinder output from all 47 species
LOC_Os02g08440.1	ATWRKY40,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os02g53100.1	WRKY9, ATWRKY9,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os03g20550.1	WRKY46,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os05g25770.1	WRKY55,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os05g27730.1	WRKY33,...	transcription factor (WRKY). transcription factor (WRKY33)	0.02	OrthoFinder output from all 47 species
LOC_Os05g39720.1	WRKY33,...	transcription factor (WRKY). transcription factor (WRKY33)	0.04	OrthoFinder output from all 47 species
LOC_Os05g40060.1	WRKY54,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
LOC_Os05g40080.1	WRKY54,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
LOC_Os05g46020.1	ATWRKY50,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os05g49100.1	ATWRKY71,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os07g02060.1	ATWRKY57,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
LOC_Os09g16510.1	WRKY46,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os09g25060.1	ATWRKY40,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os09g25070.1	ATWRKY40,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os11g29870.1	WRKY75,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
MA_10429098g0010	WRKY42, AtWRKY42	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
MA_179641g0010	ATWRKY71, WRKY71	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
MA_496691g0010	ATWRKY59, WRKY59	transcription factor (WRKY)	0.06	OrthoFinder output from all 47 species
MA_52928g0010	WRKY42, AtWRKY42	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
MA_6177g0010	AtWRKY41, WRKY41	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Mp4g00200.1	WRKY6, ATWRKY6	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Msp_g35939	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g09440	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g18765	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Solyc02g080890.3.1	WRKY6, ATWRKY6,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc03g095770.3.1	ATWRKY70,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc04g051690.4.1	ATWRKY51,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Solyc04g072070.3.1	ATWRKY51,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc05g053380.4.1	WRKY48,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc06g048870.3.1	WRKY55,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc06g068460.3.1	ATWRKY40,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc08g008280.3.1	WRKY53,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc08g067360.3.1	ATWRKY40,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc09g014990.4.1	WRKY33,...	transcription factor (WRKY). transcription factor (WRKY33)	0.02	OrthoFinder output from all 47 species
Zm00001e001512_P003	WRKY55,...	transcription factor (WRKY)	0.05	OrthoFinder output from all 47 species
Zm00001e027989_P001	WRKY53,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Zm00001e032189_P001	WRKY56,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e039528_P002	WRKY54,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	141	200

External Links

No external refs found!

Zm00001e036450_P001 (WRKY53, ATWRKY53,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation