1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e035350_P001

Zm00001e035350_P001 (Zm00001e035350)


Aliases : Zm00001e035350

Description : subunit alpha of succinyl-CoA ligase heterodimer


Gene families : OG0004750 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004750_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e035350_P001
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00055000 evm_27.TU.AmTr_v1... Cellular respiration.tricarboxylic acid... 0.05 OrthoFinder output from all 47 species
AT5G08300 No alias Succinyl-CoA ligase, alpha subunit 0.09 OrthoFinder output from all 47 species
AT5G23250 No alias Succinyl-CoA ligase, alpha subunit 0.03 OrthoFinder output from all 47 species
Als_g03006 No alias EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0002.g001138 No alias EC_6.2 ligase forming carbon-sulfur bond & original... 0.06 OrthoFinder output from all 47 species
Cba_g27955 No alias EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Ceric.03G102700.1 Ceric.03G102700 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Cre03.g193850 No alias Cellular respiration.tricarboxylic acid... 0.09 OrthoFinder output from all 47 species
Dcu_g02806 No alias EC_6.2 ligase forming carbon-sulfur bond & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01029337001 No alias Cellular respiration.tricarboxylic acid... 0.04 OrthoFinder output from all 47 species
LOC_Os07g38970.1 LOC_Os07g38970 subunit alpha of succinyl-CoA ligase heterodimer 0.15 OrthoFinder output from all 47 species
MA_10437252g0010 No alias subunit alpha of succinyl-CoA ligase heterodimer 0.05 OrthoFinder output from all 47 species
Mp7g15650.1 No alias subunit alpha of succinyl-CoA ligase heterodimer 0.09 OrthoFinder output from all 47 species
Nbi_g06652 No alias EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Sam_g23717 No alias EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Smo405593 No alias Cellular respiration.tricarboxylic acid... 0.03 OrthoFinder output from all 47 species
Solyc01g007910.3.1 Solyc01g007910 subunit alpha of succinyl-CoA ligase heterodimer 0.06 OrthoFinder output from all 47 species
Solyc02g005350.3.1 Solyc02g005350 subunit alpha of succinyl-CoA ligase heterodimer 0.07 OrthoFinder output from all 47 species
Tin_g08935 No alias EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005811 CoA_ligase 186 307
IPR003781 CoA-bd 40 133
No external refs found!