Zm00001e034816_P001 (LON2, Zm00001e034816)

Aliases : LON2, Zm00001e034816

Description : protease (LON)

Gene families : OG0001871 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001871_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e034816_P001

Target	Alias	Description	ECC score	Gene Family Method
Adi_g014214	LON_ARA_ARA, LON1	LON-type protease & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g060199	LON2	LON-type protease & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g085048	LON2	LON-type protease & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g107928	LON2	LON-type protease & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g03336	LON2	LON-type protease & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g21678	LON_ARA_ARA, LON1	LON-type protease & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g02526	LON2	LON-type protease & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0116.g046367	LON2	LON-type protease & original description: CDS=185-2839	0.06	OrthoFinder output from all 47 species
Ceric.33G051800.1	LON2, Ceric.33G051800	LON-type protease & original description: pacid=50606858...	0.05	OrthoFinder output from all 47 species
GSVIVT01013264001	LON2	Protein degradation.peptidase families.serine-type...	0.03	OrthoFinder output from all 47 species
LOC_Os09g36300.1	LON2, LOC_Os09g36300	protease (LON)	0.09	OrthoFinder output from all 47 species
Len_g02914	LON2	LON-type protease & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g02290	LON2	LON-type protease & original description: none	0.02	OrthoFinder output from all 47 species
MA_159707g0010	LON2	protease (LON)	0.04	OrthoFinder output from all 47 species
MA_68108g0010	LON2	protease (LON)	0.04	OrthoFinder output from all 47 species
MA_9793869g0010	LON2	protease (LON)	0.04	OrthoFinder output from all 47 species
Ore_g03428	LON2	LON-type protease & original description: none	0.04	OrthoFinder output from all 47 species
Smo141788	LON2	Protein degradation.peptidase families.serine-type...	0.02	OrthoFinder output from all 47 species
Solyc08g077440.3.1	LON2, Solyc08g077440	protease (LON)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004176	ATP-dependent peptidase activity	IEA	Interproscan
MF	GO:0004252	serine-type endopeptidase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006508	proteolysis	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008236	serine-type peptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017171	serine hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
MF	GO:0043531	ADP binding	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	405	542
IPR003111	Lon_prtase_N	12	254
IPR008269	Lon_proteolytic	667	874

External Links

No external refs found!

Zm00001e034816_P001 (LON2, Zm00001e034816)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation