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  5. Zm00001e033628_P002

Zm00001e033628_P002 (DOC1, ASA1, UMB1,...)


Aliases : DOC1, ASA1, UMB1, LPR1, TIR3, CRM1, BIG, Zm00001e033628

Description : BIG auxin transport regulator protein


Gene families : OG0002424 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002424_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e033628_P002

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00248360 DOC1, ASA1,... Phytohormones.auxin.transport.polar auxin transport.BIG... 0.15 OrthoFinder output from all 47 species
AMTR_s00090p00114080 DOC1, ASA1,... Phytohormones.auxin.transport.polar auxin transport.BIG... 0.06 OrthoFinder output from all 47 species
AT3G02260 DOC1, ASA1,... auxin transport protein (BIG) 0.1 OrthoFinder output from all 47 species
Adi_g017199 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.04 OrthoFinder output from all 47 species
Aev_g27442 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.02 OrthoFinder output from all 47 species
Ala_g11928 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.12 OrthoFinder output from all 47 species
Als_g10524 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.03 OrthoFinder output from all 47 species
Aob_g22705 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0061.g035098 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.04 OrthoFinder output from all 47 species
Ceric.14G095600.1 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.09 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000158.22 DOC1, ASA1,... Auxin transport protein BIG OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000158.23 DOC1, ASA1,... Auxin transport protein BIG OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
Dcu_g43763 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.1 OrthoFinder output from all 47 species
Dde_g02415 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.04 OrthoFinder output from all 47 species
Ehy_g05117 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.03 OrthoFinder output from all 47 species
Ehy_g24980 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01036538001 DOC1, ASA1,... Phytohormones.auxin.transport.polar auxin transport.BIG... 0.06 OrthoFinder output from all 47 species
Gb_03145 DOC1, ASA1,... BIG auxin transport regulator protein 0.07 OrthoFinder output from all 47 species
LOC_Os09g07300.1 DOC1, ASA1,... BIG auxin transport regulator protein 0.12 OrthoFinder output from all 47 species
Lfl_g12340 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.08 OrthoFinder output from all 47 species
MA_10425891g0010 DOC1, ASA1,... BIG auxin transport regulator protein 0.09 OrthoFinder output from all 47 species
MA_10436857g0010 DOC1, ASA1,... Auxin transport protein BIG OS=Arabidopsis thaliana... 0.16 OrthoFinder output from all 47 species
MA_10437010g0030 DOC1, ASA1,... Auxin transport protein BIG OS=Oryza sativa subsp.... 0.05 OrthoFinder output from all 47 species
MA_141071g0010 DOC1, ASA1,... Auxin transport protein BIG OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_18467g0010 DOC1, ASA1,... Auxin transport protein BIG OS=Oryza sativa subsp.... 0.06 OrthoFinder output from all 47 species
MA_92502g0010 ATROP4, ROP4,... Rac-like GTP-binding protein 7 OS=Oryza sativa subsp.... 0.05 OrthoFinder output from all 47 species
MA_9930317g0010 DOC1, ASA1,... Auxin transport protein BIG OS=Arabidopsis thaliana... 0.1 OrthoFinder output from all 47 species
Mp2g04600.1 DOC1, ASA1,... BIG auxin transport regulator protein 0.04 OrthoFinder output from all 47 species
Msp_g24012 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.05 OrthoFinder output from all 47 species
Nbi_g22773 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.02 OrthoFinder output from all 47 species
Ore_g38131 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.05 OrthoFinder output from all 47 species
Ppi_g03294 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.03 OrthoFinder output from all 47 species
Sam_g27860 No alias regulatory protein *(BIG) of auxin transport & original... 0.04 OrthoFinder output from all 47 species
Smo141341 DOC1, ASA1,... Phytohormones.auxin.transport.polar auxin transport.BIG... 0.06 OrthoFinder output from all 47 species
Solyc02g089260.4.1 DOC1, ASA1,... BIG auxin transport regulator protein 0.05 OrthoFinder output from all 47 species
Spa_g17799 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0017069 snRNA binding IEP HCCA
MF GO:0017070 U6 snRNA binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030623 U5 snRNA binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR025704 E3_Ub_ligase_UBR4_C 4141 5038
IPR000433 Znf_ZZ 2571 2603
No external refs found!