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Aliases : SCC2, ATSCC2, EMB2773, Zm00001e032695
Description : adherin (SCC2)
Gene families : OG0005074 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005074_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e032695_P001 | |
| Cluster | HCCA: Cluster_163 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00110p00053630 | SCC2, ATSCC2,... | Cell cycle.mitosis and meiosis.sister chromatid... | 0.02 | OrthoFinder output from all 47 species | |
| AT5G15540 | SCC2, ATSCC2, EMB2773 | PHD finger family protein | 0.16 | OrthoFinder output from all 47 species | |
| Adi_g086269 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g04894 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g16239 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Als_g08111 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g31097 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g05755 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.14G000800.1 | SCC2, ATSCC2,... | adherin *(SCC2) & original description: pacid=50634323... | 0.09 | OrthoFinder output from all 47 species | |
| Dcu_g39401 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g06224 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01011514001 | SCC2, ATSCC2, EMB2773 | Cell cycle.mitosis and meiosis.sister chromatid... | 0.12 | OrthoFinder output from all 47 species | |
| Gb_05661 | SCC2, ATSCC2, EMB2773 | adherin (SCC2) | 0.06 | OrthoFinder output from all 47 species | |
| Gb_41687 | SCC2, ATSCC2, EMB2773 | adherin (SCC2) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os07g01940.1 | SCC2, ATSCC2,... | adherin (SCC2) | 0.06 | OrthoFinder output from all 47 species | |
| Len_g24640 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g05042 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| MA_10436664g0010 | SCC2, ATSCC2, EMB2773 | adherin (SCC2) | 0.02 | OrthoFinder output from all 47 species | |
| MA_10437214g0020 | SCC2, ATSCC2, EMB2773 | adherin (SCC2) | 0.09 | OrthoFinder output from all 47 species | |
| Mp4g10640.1 | SCC2, ATSCC2, EMB2773 | adherin (SCC2) | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g24576 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g28888 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g08021 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ppi_g05355 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0059.g015105 | SCC2, ATSCC2, EMB2773 | not classified & original description: CDS=1-927 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g26001 | No alias | adherin *(SCC2) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g48907 | No alias | adherin *(SCC2) & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Smo440913 | SCC2, ATSCC2, EMB2773 | Cell cycle.mitosis and meiosis.sister chromatid... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g04412 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g05250 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.07 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
| CC | GO:0016592 | mediator complex | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| No external refs found! |