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  5. Zm00001e032122_P001

Zm00001e032122_P001 (TCP5, Zm00001e032122)


Aliases : TCP5, Zm00001e032122

Description : transcription factor (TCP)


Gene families : OG0000529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000529_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e032122_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00113360 TCP2,... RNA biosynthesis.transcriptional activation.TCP... 0.03 OrthoFinder output from all 47 species
AT1G30210 ATTCP24, TCP24 TEOSINTE BRANCHED 1, cycloidea, and PCF family 24 0.03 OrthoFinder output from all 47 species
AT4G18390 TCP2 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 0.04 OrthoFinder output from all 47 species
Aev_g08212 ATTCP24, TCP24 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g30836 TCP10 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27741.t1 TCP2, Aspi01Gene27741 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g37950 TCP13, TFPD, PTF1 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g28469 TCP3 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008109001 TCP5 RNA biosynthesis.transcriptional activation.TCP... 0.03 OrthoFinder output from all 47 species
GSVIVT01008234001 TCP12, BRC2 RNA biosynthesis.transcriptional activation.TCP... 0.04 OrthoFinder output from all 47 species
GSVIVT01014236001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.02 OrthoFinder output from all 47 species
GSVIVT01036449001 TCP1 RNA biosynthesis.transcriptional activation.TCP... 0.04 OrthoFinder output from all 47 species
LOC_Os01g11550.1 TCP4, MEE35,... transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
LOC_Os05g43760.1 TCP5, LOC_Os05g43760 transcription factor (TCP) 0.07 OrthoFinder output from all 47 species
MA_101752g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10426407g0020 TCP13, TFPD, PTF1 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
MA_35349g0010 TCP2 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
MA_4774g0010 TCP2 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Pnu_g26630 TCP2 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g115010.3.1 TCP5, Solyc03g115010 transcription factor (TCP) 0.06 OrthoFinder output from all 47 species
Zm00001e009811_P001 BRC1, ATTCP18,... transcription factor (TCP) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 61 122
No external refs found!