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Aliases : Zm00001e031880
Description : RING-HC-class E3 ligase
Gene families : OG0000266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000266_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e031880_P001 | |
| Cluster | HCCA: Cluster_137 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G58030 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g006491 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g021123 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g110750 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene43421.t1 | Aspi01Gene43421 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0011.g012446 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0256.g060525 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.18G045100.1 | Ceric.18G045100 | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g30245 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g05375 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g09951 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g11588 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g61420.1 | LOC_Os01g61420 | RING-HC-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Len_g01833 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g29783 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| MA_132683g0010 | No alias | RING-HC-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g38674 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000757 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000123 | histone acetyltransferase complex | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0007186 | G protein-coupled receptor signaling pathway | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0009719 | response to endogenous stimulus | IEP | HCCA |
| BP | GO:0009725 | response to hormone | IEP | HCCA |
| BP | GO:0010033 | response to organic substance | IEP | HCCA |
| MF | GO:0016409 | palmitoyltransferase activity | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| CC | GO:0031248 | protein acetyltransferase complex | IEP | HCCA |
| MF | GO:0031683 | G-protein beta/gamma-subunit complex binding | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| BP | GO:0042221 | response to chemical | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| MF | GO:0044877 | protein-containing complex binding | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| CC | GO:0070461 | SAGA-type complex | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| CC | GO:1902493 | acetyltransferase complex | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |