Zm00001e031159_P001 (ATWRKY50, WRKY50,...)

Aliases : ATWRKY50, WRKY50, Zm00001e031159

Description : transcription factor (WRKY)

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e031159_P001
Cluster	HCCA: Cluster_158

Target	Alias	Description	ECC score	Gene Family Method
AT1G29860	ATWRKY71, WRKY71	WRKY DNA-binding protein 71	0.04	OrthoFinder output from all 47 species
AT2G37260	WRKY44, TTG2,...	WRKY family transcription factor family protein	0.03	OrthoFinder output from all 47 species
AT2G40750	WRKY54, ATWRKY54	WRKY DNA-binding protein 54	0.02	OrthoFinder output from all 47 species
AT3G01080	ATWRKY58, WRKY58	WRKY DNA-binding protein 58	0.03	OrthoFinder output from all 47 species
AT3G56400	ATWRKY70, WRKY70	WRKY DNA-binding protein 70	0.02	OrthoFinder output from all 47 species
AT4G01720	AtWRKY47, WRKY47	WRKY family transcription factor	0.03	OrthoFinder output from all 47 species
Adi_g075272	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g01407	WRKY23, ATWRKY23	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g16607	WRKY53, ATWRKY53	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g25778	ATWRKY57, WRKY57	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g20939	WRKY3	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g57885	WRKY43, ATWRKY43	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g59338	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0314.g064268	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: CDS=1-2127	0.03	OrthoFinder output from all 47 species
Azfi_s0505.g073943	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: CDS=1-474	0.04	OrthoFinder output from all 47 species
Cba_g15116	WRKY3	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g19526	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g27507	ATWRKY50, WRKY50	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.24G019100.1	Ceric.24G019100	WRKY-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Dac_g12166	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g11035	ATWRKY58, WRKY58	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g16670	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g18481	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g31448	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g24743	ATWRKY24, WRKY24	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01022245001	ATWRKY51, WRKY51	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01028244001	AtWRKY47, WRKY47	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01030174001	WRKY54, ATWRKY54	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
Gb_31953	WRKY4	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os01g46800.1	WRKY53,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os02g43560.1	LOC_Os02g43560	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
LOC_Os02g53100.1	WRKY9, ATWRKY9,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
LOC_Os05g09020.1	ATWRKY50,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os05g49620.1	WRKY53,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os11g45920.1	WRKY26, LOC_Os11g45920	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
MA_426605g0010	No alias	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
MA_47052g0010	WRKY42, AtWRKY42	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
MA_52928g0010	WRKY42, AtWRKY42	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
MA_740729g0010	ATWRKY50, WRKY50	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
MA_7831917g0010	AtWRKY47, WRKY47	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
MA_93790g0010	ATWRKY71, WRKY71	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Nbi_g36467	WRKY55, ATWRKY55	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g06236	No alias	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Solyc03g007380.2.1	AtWRKY41,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc04g072070.3.1	ATWRKY51,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc05g050340.4.1	WRKY55,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc06g048870.3.1	WRKY55,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc06g066370.4.1	WRKY33,...	transcription factor (WRKY). transcription factor (WRKY33)	0.02	OrthoFinder output from all 47 species
Solyc06g070990.3.1	WRKY61,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc08g008280.3.1	WRKY53,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc08g067340.4.1	ATWRKY40,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Solyc08g081630.2.1	WRKY56,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc09g014990.4.1	WRKY33,...	transcription factor (WRKY). transcription factor (WRKY33)	0.02	OrthoFinder output from all 47 species
Solyc10g009550.3.1	ATWRKY30,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Tin_g14530	WRKY4	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g19874	ATWRKY50, WRKY50	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e007834_P002	WRKY2, ATWRKY2,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e011098_P001	WRKY75,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Zm00001e020410_P001	WRKY28,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e025096_P001	ATWRKY40,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e035859_P001	WRKY46,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	144	200

External Links

No external refs found!

Zm00001e031159_P001 (ATWRKY50, WRKY50,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation