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  5. Zm00001e031101_P001

Zm00001e031101_P001 (Zm00001e031101)


Aliases : Zm00001e031101

Description : PHD finger transcription factor


Gene families : OG0000402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e031101_P001
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
Adi_g001198 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40689.t1 Aspi01Gene40689 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40690.t1 Aspi01Gene40690 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g14795 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01026454001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.03 OrthoFinder output from all 47 species
Msp_g42576 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13686 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g35938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01084 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08147 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003446 No alias not classified & original description: CDS=1-1437 0.02 OrthoFinder output from all 47 species
Sam_g10530 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g078120.2.1 Solyc08g078120 PHD finger transcription factor 0.04 OrthoFinder output from all 47 species
Tin_g21039 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008080 N-acetyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR032308 TDBD 368 438
IPR000182 GNAT_dom 698 769
No external refs found!