Zm00001e030534_P001 (Zm00001e030534)

Aliases : Zm00001e030534

Description : Exopolygalacturonase OS=Zea mays (sp|p26216|pglr1_maize : 778.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 319.5)

Gene families : OG0003404 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003404_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e030534_P001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00059p00207710	evm_27.TU.AmTr_v1...	Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase	0.04	OrthoFinder output from all 47 species
AT3G07830	No alias	Pectin lyase-like superfamily protein	0.02	OrthoFinder output from all 47 species
AT3G07840	No alias	Pectin lyase-like superfamily protein	0.04	OrthoFinder output from all 47 species
AT3G07850	No alias	Pectin lyase-like superfamily protein	0.03	OrthoFinder output from all 47 species
AT3G14040	No alias	Pectin lyase-like superfamily protein	0.05	OrthoFinder output from all 47 species
AT5G48140	No alias	Pectin lyase-like superfamily protein	0.03	OrthoFinder output from all 47 species
GSVIVT01030017001	No alias	Polygalacturonase OS=Gossypium hirsutum	0.03	OrthoFinder output from all 47 species
GSVIVT01035103001	No alias	Exopolygalacturonase (Fragment) OS=Platanus acerifolia	0.04	OrthoFinder output from all 47 species
LOC_Os01g33300.1	LOC_Os01g33300	Exopolygalacturonase OS=Zea mays (sp\|p35339\|pglr3_maize...	0.07	OrthoFinder output from all 47 species
LOC_Os02g10300.1	LOC_Os02g10300	Exopolygalacturonase OS=Zea mays (sp\|p35339\|pglr3_maize...	0.07	OrthoFinder output from all 47 species
LOC_Os06g35320.1	LOC_Os06g35320	Exopolygalacturonase OS=Zea mays (sp\|p35339\|pglr3_maize...	0.06	OrthoFinder output from all 47 species
Solyc07g044870.4.1	Solyc07g044870	Polygalacturonase OS=Nicotiana tabacum...	0.05	OrthoFinder output from all 47 species
Zm00001e002846_P002	Zm00001e002846	Exopolygalacturonase (Fragment) OS=Platanus acerifolia...	0.04	OrthoFinder output from all 47 species
Zm00001e022246_P002	Zm00001e022246	Exopolygalacturonase (Fragment) OS=Platanus acerifolia...	0.05	OrthoFinder output from all 47 species
Zm00001e030538_P001	PGA4, Zm00001e030538	Exopolygalacturonase OS=Zea mays (sp\|p26216\|pglr1_maize...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004650	polygalacturonase activity	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004252	serine-type endopeptidase activity	IEP	HCCA
MF	GO:0004512	inositol-3-phosphate synthase activity	IEP	HCCA
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	HCCA
MF	GO:0005094	Rho GDP-dissociation inhibitor activity	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0006020	inositol metabolic process	IEP	HCCA
BP	GO:0006021	inositol biosynthetic process	IEP	HCCA
BP	GO:0006066	alcohol metabolic process	IEP	HCCA
BP	GO:0006644	phospholipid metabolic process	IEP	HCCA
BP	GO:0006813	potassium ion transport	IEP	HCCA
BP	GO:0008654	phospholipid biosynthetic process	IEP	HCCA
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	HCCA
MF	GO:0016872	intramolecular lyase activity	IEP	HCCA
BP	GO:0019751	polyol metabolic process	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
MF	GO:0030599	pectinesterase activity	IEP	HCCA
MF	GO:0030695	GTPase regulator activity	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
BP	GO:0046165	alcohol biosynthetic process	IEP	HCCA
BP	GO:0046173	polyol biosynthetic process	IEP	HCCA
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA
BP	GO:0071805	potassium ion transmembrane transport	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA
MF	GO:0140677	molecular function activator activity	IEP	HCCA
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	HCCA
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000743	Glyco_hydro_28	68	399

External Links

No external refs found!

Zm00001e030534_P001 (Zm00001e030534)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation