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  5. Zm00001e029452_P001

Zm00001e029452_P001 (VTC5, Zm00001e029452)


Aliases : VTC5, Zm00001e029452

Description : GDP-L-galactose phosphorylase (VTC2/5)


Gene families : OG0002288 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002288_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e029452_P001
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AT4G26850 VTC2 mannose-1-phosphate guanylyltransferase... 0.08 OrthoFinder output from all 47 species
Adi_g111747 VTC5 GDP-L-galactose phosphorylase *(VTC2/5) & original... 0.02 OrthoFinder output from all 47 species
Ala_g13427 VTC2 GDP-L-galactose phosphorylase *(VTC2/5) & original... 0.02 OrthoFinder output from all 47 species
Als_g48672 VTC2 GDP-L-galactose phosphorylase *(VTC2/5) & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene15220.t1 VTC2, Aspi01Gene15220 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g07594 VTC2 GDP-L-galactose phosphorylase *(VTC2/5) & original... 0.04 OrthoFinder output from all 47 species
Dac_g09213 VTC2 GDP-L-galactose phosphorylase *(VTC2/5) & original... 0.02 OrthoFinder output from all 47 species
LOC_Os12g08810.1 VTC5, LOC_Os12g08810 GDP-L-galactose phosphorylase (VTC2/5) 0.1 OrthoFinder output from all 47 species
Mp1g07760.1 VTC2 GDP-L-galactose phosphorylase (VTC2/5) 0.03 OrthoFinder output from all 47 species
Msp_g15138 VTC2 GDP-L-galactose phosphorylase *(VTC2/5) & original... 0.04 OrthoFinder output from all 47 species
Msp_g15139 VTC2 GDP-L-galactose phosphorylase *(VTC2/5) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g24483 VTC2 GDP-L-galactose phosphorylase *(VTC2/5) & original... 0.05 OrthoFinder output from all 47 species
Pir_g16667 VTC2 GDP-L-galactose phosphorylase *(VTC2/5) & original... 0.02 OrthoFinder output from all 47 species
Sam_g26126 No alias GDP-L-galactose phosphorylase *(VTC2/5) & original... 0.03 OrthoFinder output from all 47 species
Smo99090 VTC2 Redox homeostasis.low-molecular-weight... 0.08 OrthoFinder output from all 47 species
Solyc06g073320.3.1 VTC2, Solyc06g073320 GDP-L-galactose phosphorylase (VTC2/5) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005849 mRNA cleavage factor complex IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0006378 mRNA polyadenylation IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016157 sucrose synthase activity IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!