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  5. Zm00001e028965_P001

Zm00001e028965_P001 (Zm00001e028965)


Aliases : Zm00001e028965

Description : transcription factor (bHLH)


Gene families : OG0012398 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012398_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e028965_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00265060 BHLH92,... RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
AT5G43650 BHLH92 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 OrthoFinder output from all 47 species
Aev_g18920 EGL1, EGL3, ATMYC-2 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01018111001 BHLH92 RNA biosynthesis.transcriptional activation.bHLH... 0.08 OrthoFinder output from all 47 species
Gb_09710 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os01g56690.1 LOC_Os01g56690 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
LOC_Os03g53020.1 LOC_Os03g53020 transcription factor (bHLH) 0.13 OrthoFinder output from all 47 species
MA_126261g0010 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_76955g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc09g083360.3.1 BHLH92, Solyc09g083360 transcription factor (bHLH) 0.09 OrthoFinder output from all 47 species
Zm00001e005624_P001 Zm00001e005624 transcription factor (bHLH) 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009690 cytokinin metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0019139 cytokinin dehydrogenase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 120 167
No external refs found!