- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : Zm00001e028572
Description : no hits & (original description: none)
Gene families : OG0000370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000370_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e028572_P001 | |
| Cluster | HCCA: Cluster_62 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00105p00126340 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| AT4G02075 | PIT1 | RING/FYVE/PHD zinc finger superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G38070 | No alias | RING/FYVE/PHD zinc finger superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g056933 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g074839 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g07597 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g40952 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g46783 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g43317 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g62786 | No alias | E3 ubiquitin ligase & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene47819.t1 | Aspi01Gene47819 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene49653.t1 | Aspi01Gene49653 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0052.g031639 | No alias | E3 ubiquitin ligase & original description: CDS=1-1089 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0591.g078731 | No alias | not classified & original description: CDS=293-1048 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s1036.g095899 | No alias | not classified & original description: CDS=293-679 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g00910 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g05081 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07518 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g68684 | No alias | E3 ubiquitin ligase & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g77375 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.11G023000.1 | Ceric.11G023000 | E3 ubiquitin ligase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.22G004900.1 | Ceric.22G004900 | E3 ubiquitin ligase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.23G021200.1 | Ceric.23G021200 | E3 ubiquitin ligase & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g01320 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g09799 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g06352 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g01110 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01028110001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01030910001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_38414 | No alias | RING-v-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g49280.1 | LOC_Os01g49280 | RING-v-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g66970.1 | LOC_Os01g66970 | RING-v-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g28730.1 | LOC_Os05g28730 | RING-v-class E3 ligase | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os08g33860.1 | LOC_Os08g33860 | RING-v-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os11g38800.1 | LOC_Os11g38800 | RING-v-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Len_g02124 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g05288 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g08617 | No alias | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g15643 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g59358 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g18351 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g07017 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g07989 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g51830 | No alias | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g58767 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g09771 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0033.g010979 | No alias | E3 ubiquitin ligase & original description: CDS=450-1109 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g50720 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo420592 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g010880.3.1 | Solyc01g010880 | RING-v-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g007600.4.1 | Solyc04g007600 | RING-v-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g069780.4.1 | Solyc06g069780 | RING-v-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Solyc08g014080.4.1 | Solyc08g014080 | RING-v-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g40447 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g10556 | No alias | E3 ubiquiTin ligase & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e009834_P004 | Zm00001e009834 | RING-v-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e026209_P003 | Zm00001e026209 | RING-v-class E3 ligase | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004061 | arylformamidase activity | IEP | HCCA |
| MF | GO:0004180 | carboxypeptidase activity | IEP | HCCA |
| MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | HCCA |
| MF | GO:0005506 | iron ion binding | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006568 | tryptophan metabolic process | IEP | HCCA |
| BP | GO:0006569 | tryptophan catabolic process | IEP | HCCA |
| BP | GO:0006576 | biogenic amine metabolic process | IEP | HCCA |
| BP | GO:0006586 | indolalkylamine metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008171 | O-methyltransferase activity | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
| MF | GO:0008238 | exopeptidase activity | IEP | HCCA |
| BP | GO:0009063 | amino acid catabolic process | IEP | HCCA |
| BP | GO:0009072 | aromatic amino acid metabolic process | IEP | HCCA |
| BP | GO:0009074 | aromatic amino acid family catabolic process | IEP | HCCA |
| BP | GO:0009308 | amine metabolic process | IEP | HCCA |
| MF | GO:0010333 | terpene synthase activity | IEP | HCCA |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015297 | antiporter activity | IEP | HCCA |
| BP | GO:0016054 | organic acid catabolic process | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | HCCA |
| MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | HCCA |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
| MF | GO:0016838 | carbon-oxygen lyase activity, acting on phosphates | IEP | HCCA |
| MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
| BP | GO:0019441 | tryptophan catabolic process to kynurenine | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0020037 | heme binding | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| BP | GO:0042180 | cellular ketone metabolic process | IEP | HCCA |
| BP | GO:0042430 | indole-containing compound metabolic process | IEP | HCCA |
| BP | GO:0042436 | indole-containing compound catabolic process | IEP | HCCA |
| BP | GO:0042537 | benzene-containing compound metabolic process | IEP | HCCA |
| MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
| BP | GO:0044282 | small molecule catabolic process | IEP | HCCA |
| BP | GO:0046395 | carboxylic acid catabolic process | IEP | HCCA |
| BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
| MF | GO:0070008 | serine-type exopeptidase activity | IEP | HCCA |
| BP | GO:0070189 | kynurenine metabolic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
| BP | GO:1901606 | alpha-amino acid catabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |