1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e028331_P001

Zm00001e028331_P001 (BOP2, Zm00001e028331)


Aliases : BOP2, Zm00001e028331

Description : transcriptional co-activator (BOP)


Gene families : OG0001046 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001046_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e028331_P001
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00112510 ATNPR3, NPR3,... Phytohormones.salicylic acid.perception and signal... 0.04 OrthoFinder output from all 47 species
AT4G26120 No alias Ankyrin repeat family protein / BTB/POZ domain-containing protein 0.02 OrthoFinder output from all 47 species
AT5G45110 ATNPR3, NPR3 NPR1-like protein 3 0.06 OrthoFinder output from all 47 species
Aev_g11585 BOP2 transcriptional co-activator *(BOP) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g02401 BOP2 transcriptional co-activator *(BOP) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05458 BOP2 transcriptional co-activator *(BOP) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0015.g013694 BOP2 not classified & original description: CDS=1-1683 0.06 OrthoFinder output from all 47 species
Cba_g48776 BOP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033571001 BOP2 RNA biosynthesis.transcriptional activation.bZIP... 0.06 OrthoFinder output from all 47 species
Gb_06351 BOP1 no description available(sp|a0a072vim5|noot2_medtr : 169.0) 0.03 OrthoFinder output from all 47 species
LOC_Os01g09800.1 NPR1, SAI1,... salicylic acid receptor protein (NPR1). NPR1 systemic... 0.05 OrthoFinder output from all 47 species
LOC_Os01g72020.1 BOP2, LOC_Os01g72020 transcriptional co-activator (BOP) 0.06 OrthoFinder output from all 47 species
LOC_Os11g04600.1 BOP2, LOC_Os11g04600 transcriptional co-activator (BOP) 0.04 OrthoFinder output from all 47 species
LOC_Os12g04410.1 BOP2, LOC_Os12g04410 transcriptional co-activator (BOP) 0.05 OrthoFinder output from all 47 species
Len_g32492 NPR4, ATNPR4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_180602g0010 NPR1, SAI1, ATNPR1, NIM1 no description available(sp|e7bqv0|npr1_malhu : 110.0) 0.04 OrthoFinder output from all 47 species
Nbi_g04874 ATNPR3, NPR3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10857 ATNPR3, NPR3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62749 BOP2 transcriptional co-activator *(BOP) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g019986 BOP1 not classified & original description: CDS=344-2182 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020762 BOP1 not classified & original description: CDS=1-1593 0.03 OrthoFinder output from all 47 species
Sam_g07933 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g069310.3.1 ATNPR3, NPR3,... receptor protein (NPR3|4) 0.02 OrthoFinder output from all 47 species
Solyc07g044980.3.1 ATNPR3, NPR3,... receptor protein (NPR3|4) 0.04 OrthoFinder output from all 47 species
Solyc10g079460.1.1 BOP2, Solyc10g079460 transcriptional co-activator (BOP) 0.01 OrthoFinder output from all 47 species
Solyc10g079750.2.1 BOP2, Solyc10g079750 transcriptional co-activator (BOP) 0.04 OrthoFinder output from all 47 species
Tin_g11830 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g12666 BOP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17466 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e009187_P001 BOP2, Zm00001e009187 transcriptional co-activator (BOP) 0.06 OrthoFinder output from all 47 species
Zm00001e024092_P001 BOP2, Zm00001e024092 BTB/POZ domain and ankyrin repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e028982_P001 ATNPR3, NPR3,... receptor protein (NPR3|4) 0.04 OrthoFinder output from all 47 species
Zm00001e039194_P004 BOP2, Zm00001e039194 transcriptional co-activator (BOP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 14 119
IPR020683 DUF3447 278 360
IPR024228 NPR_central_dom 208 261
No external refs found!