Zm00001e027702_P001 (ATWRKY50, WRKY50,...)

Aliases : ATWRKY50, WRKY50, Zm00001e027702

Description : transcription factor (WRKY)

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e027702_P001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00013p00160270	WRKY75,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AMTR_s00015p00181570	WRKY6, ATWRKY6,...	RNA biosynthesis.transcriptional activation.WRKY...	0.01	OrthoFinder output from all 47 species
AMTR_s00045p00128140	WRKY42,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AMTR_s00065p00201830	ATWRKY40,...	RNA biosynthesis.transcriptional activation.WRKY...	0.01	OrthoFinder output from all 47 species
AT1G62300	WRKY6, ATWRKY6	WRKY family transcription factor	0.01	OrthoFinder output from all 47 species
AT1G66600	ABO3, WRKY63, ATWRKY63	ABA overly sensitive mutant 3	0.02	OrthoFinder output from all 47 species
AT2G40750	WRKY54, ATWRKY54	WRKY DNA-binding protein 54	0.01	OrthoFinder output from all 47 species
AT2G47260	WRKY23, ATWRKY23	WRKY DNA-binding protein 23	0.01	OrthoFinder output from all 47 species
AT3G56400	ATWRKY70, WRKY70	WRKY DNA-binding protein 70	0.01	OrthoFinder output from all 47 species
AT4G23810	WRKY53, ATWRKY53	WRKY family transcription factor	0.01	OrthoFinder output from all 47 species
Aev_g04786	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g19011	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g20941	WRKY4	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene00114.t1	WRKY53,...	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene64693.t1	WRKY6, ATWRKY6,...	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0314.g064268	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: CDS=1-2127	0.04	OrthoFinder output from all 47 species
Azfi_s0937.g093180	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: CDS=1-1605	0.02	OrthoFinder output from all 47 species
Ceric.13G048400.1	WRKY3, Ceric.13G048400	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Gb_02625	WRKY75, ATWRKY75	transcription factor (WRKY)	0.01	OrthoFinder output from all 47 species
LOC_Os01g18584.1	AtWRKY47,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os03g21710.1	ATWRKY70,...	transcription factor (WRKY)	0.01	OrthoFinder output from all 47 species
LOC_Os03g45450.1	ATWRKY71,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os05g09020.1	ATWRKY50,...	transcription factor (WRKY)	0.01	OrthoFinder output from all 47 species
LOC_Os08g29660.1	WRKY53,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Len_g48398	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
MA_10429098g0010	WRKY42, AtWRKY42	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_10432362g0010	ATWRKY50, WRKY50	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
MA_11072g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_6177g0010	AtWRKY41, WRKY41	transcription factor (WRKY)	0.01	OrthoFinder output from all 47 species
MA_7068293g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Nbi_g34132	WRKY75, ATWRKY75	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g19872	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g34398	ATWRKY50, WRKY50	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g31216	WRKY44, TTG2,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Solyc04g051690.4.1	ATWRKY51,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc04g072070.3.1	ATWRKY51,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc05g015850.4.1	WRKY75,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Zm00001e005732_P002	ATWRKY57,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e027140_P002	WRKY33,...	transcription factor (WRKY). transcription factor (WRKY33)	0.02	OrthoFinder output from all 47 species
Zm00001e032260_P001	ATWRKY50,...	transcription factor (WRKY)	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	105	161

External Links

No external refs found!

Zm00001e027702_P001 (ATWRKY50, WRKY50,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation