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  5. Zm00001e026826_P001

Zm00001e026826_P001 (HCHIB, B-CHI,...)


Aliases : HCHIB, B-CHI, ATHCHIB, PR-3, PR3, CHI-B, Zm00001e026826

Description : Chitinase 2 OS=Oryza sativa subsp. japonica (sp|q7dna1|chi2_orysj : 399.0)


Gene families : OG0000280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000280_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e026826_P001

Target Alias Description ECC score Gene Family Method Actions
AT2G43570 CHI chitinase, putative 0.02 OrthoFinder output from all 47 species
AT3G47540 No alias Chitinase family protein 0.02 OrthoFinder output from all 47 species
Aev_g37268 HCHIB, B-CHI,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04363 HCHIB, B-CHI,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_20764 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os06g51050.1 HCHIB, B-CHI,... Chitinase 3 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os06g51060.1 HCHIB, B-CHI,... Chitinase 1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os10g39680.1 HCHIB, B-CHI,... Chitinase 8 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_10313114g0010 HCHIB, B-CHI,... Endochitinase B OS=Nicotiana tabacum... 0.04 OrthoFinder output from all 47 species
MA_60284g0010 ATEP3, EP3,... Chitinase 6 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Nbi_g20262 ATEP3, EP3,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g23741 ATEP3, EP3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42172 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g061770.4.1 HCHIB, B-CHI,... Basic endochitinase (Fragment) OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Solyc02g082920.4.1 HCHIB, B-CHI,... Acidic 26 kDa endochitinase OS=Solanum lycopersicum... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA Interproscan
BP GO:0006032 chitin catabolic process IEA Interproscan
MF GO:0008061 chitin binding IEA Interproscan
BP GO:0016998 cell wall macromolecule catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
InterPro domains Description Start Stop
IPR001002 Chitin-bd_1 56 93
IPR000726 Glyco_hydro_19_cat 109 340
No external refs found!