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Aliases : Zm00001e025519
Description : hydroxymethylglutaryl-CoA lyase
Gene families : OG0002348 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002348_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e025519_P001 | |
| Cluster | HCCA: Cluster_61 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aspi01Gene63577.t1 | Aspi01Gene63577 | EC_4.1 carbon-carbon lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g35492 | No alias | EC_4.1 carbon-carbon lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g14384 | No alias | EC_4.1 carbon-carbon lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g16350.1 | LOC_Os01g16350 | hydroxymethylglutaryl-CoA lyase | 0.07 | OrthoFinder output from all 47 species | |
| Msp_g00530 | No alias | EC_4.1 carbon-carbon lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g30358 | No alias | EC_4.1 carbon-carbon lyase & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004590 | orotidine-5'-phosphate decarboxylase activity | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| BP | GO:0006206 | pyrimidine nucleobase metabolic process | IEP | HCCA |
| BP | GO:0006207 | 'de novo' pyrimidine nucleobase biosynthetic process | IEP | HCCA |
| MF | GO:0008430 | selenium binding | IEP | HCCA |
| BP | GO:0009112 | nucleobase metabolic process | IEP | HCCA |
| BP | GO:0009116 | nucleoside metabolic process | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016746 | acyltransferase activity | IEP | HCCA |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
| MF | GO:0016829 | lyase activity | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| BP | GO:0019856 | pyrimidine nucleobase biosynthetic process | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0046112 | nucleobase biosynthetic process | IEP | HCCA |
| MF | GO:0046912 | acyltransferase activity, acyl groups converted into alkyl on transfer | IEP | HCCA |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
| BP | GO:1901657 | glycosyl compound metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000891 | PYR_CT | 135 | 408 |
| No external refs found! |