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  5. Zm00001e025069_P001

Zm00001e025069_P001 (SVL5, Zm00001e025069)


Aliases : SVL5, Zm00001e025069

Description : Glycerophosphodiester phosphodiesterase GDPDL7 OS=Arabidopsis thaliana (sp|q9lvn0|gpdl7_arath : 689.0)


Gene families : OG0002387 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002387_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e025069_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00174750 GPDL2, SHV3,... Glycerophosphodiester phosphodiesterase GDPDL3... 0.03 OrthoFinder output from all 47 species
AMTR_s00252p00015420 SVL4,... Glycerophosphodiester phosphodiesterase GDPDL6... 0.11 OrthoFinder output from all 47 species
AT4G26690 GPDL2, SHV3, MRH5 PLC-like phosphodiesterase family protein 0.05 OrthoFinder output from all 47 species
AT5G58050 SVL4 SHV3-like 4 0.07 OrthoFinder output from all 47 species
AT5G58170 SVL5 SHV3-like 5 0.04 OrthoFinder output from all 47 species
Als_g14503 SVL5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08832 SVL4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0064.g035674 SVL5 not classified & original description: CDS=1-2358 0.02 OrthoFinder output from all 47 species
Ceric.08G056600.1 SVL5, Ceric.08G056600 not classified & original description: pacid=50637619... 0.03 OrthoFinder output from all 47 species
GSVIVT01003731001 SVL5 Glycerophosphodiester phosphodiesterase GDPDL6... 0.09 OrthoFinder output from all 47 species
Gb_10598 SVL1 Glycerophosphodiester phosphodiesterase GDPDL4... 0.03 OrthoFinder output from all 47 species
LOC_Os02g09450.1 SVL5, LOC_Os02g09450 Glycerophosphodiester phosphodiesterase GDPDL7... 0.18 OrthoFinder output from all 47 species
LOC_Os04g39610.1 GPDL2, SHV3,... Glycerophosphodiester phosphodiesterase GDPDL4... 0.04 OrthoFinder output from all 47 species
LOC_Os08g39350.1 SVL1, LOC_Os08g39350 Glycerophosphodiester phosphodiesterase GDPDL4... 0.02 OrthoFinder output from all 47 species
LOC_Os12g27102.1 SVL1, LOC_Os12g27102 Glycerophosphodiester phosphodiesterase GDPDL4... 0.02 OrthoFinder output from all 47 species
Len_g08984 SVL5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp8g07940.1 SVL5 Glycerophosphodiester phosphodiesterase GDPDL7... 0.02 OrthoFinder output from all 47 species
Sam_g05113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g014490.4.1 SVL4, Solyc02g014490 Glycerophosphodiester phosphodiesterase GDPDL7... 0.13 OrthoFinder output from all 47 species
Solyc02g014530.4.1 SVL4, Solyc02g014530 Glycerophosphodiester phosphodiesterase GDPDL6... 0.12 OrthoFinder output from all 47 species
Solyc07g065120.3.1 SVL1, Solyc07g065120 Glycerophosphodiester phosphodiesterase GDPDL4... 0.02 OrthoFinder output from all 47 species
Spa_g21490 SVL5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e014970_P001 GPDL2, SHV3,... Glycerophosphodiester phosphodiesterase GDPDL3... 0.03 OrthoFinder output from all 47 species
Zm00001e041063_P001 GPDL2, SHV3,... Glycerophosphodiester phosphodiesterase GDPDL3... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
MF GO:0008081 phosphoric diester hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP HCCA
MF GO:0030570 pectate lyase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR030395 GP_PDE_dom 363 650
No external refs found!