Zm00001e025053_P001 (Zm00001e025053)


Aliases : Zm00001e025053

Description : protein kinase (LysM). LysM receptor kinase (NFR1/LYK3)


Gene families : OG0001397 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001397_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e025053_P001
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00063910 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.06 OrthoFinder output from all 47 species
AT2G33580 No alias Protein kinase superfamily protein 0.06 OrthoFinder output from all 47 species
Adi_g054962 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Ala_g22316 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Als_g47956 No alias EC_2.7 transferase transferring phosphorus-containing... 0.05 OrthoFinder output from all 47 species
Aob_g16981 No alias EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Aop_g07383 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Aspi01Gene21462.t1 Aspi01Gene21462 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Aspi01Gene31980.t1 Aspi01Gene31980 EC_2.7 transferase transferring phosphorus-containing... 0.05 OrthoFinder output from all 47 species
Aspi01Gene31984.t1 Aspi01Gene31984 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Aspi01Gene34154.t1 Aspi01Gene34154 EC_2.7 transferase transferring phosphorus-containing... 0.06 OrthoFinder output from all 47 species
Aspi01Gene34155.t1 Aspi01Gene34155 EC_2.7 transferase transferring phosphorus-containing... 0.06 OrthoFinder output from all 47 species
Azfi_s0145.g051647 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Cba_g17065 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Cba_g75401 No alias EC_2.7 transferase transferring phosphorus-containing... 0.06 OrthoFinder output from all 47 species
Dac_g21986 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Dcu_g13751 No alias EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Ehy_g04998 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Ehy_g26539 No alias EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
GSVIVT01013461001 No alias Protein modification.phosphorylation.TKL kinase... 0.06 OrthoFinder output from all 47 species
GSVIVT01019038001 No alias External stimuli response.biotic... 0.05 OrthoFinder output from all 47 species
Gb_09697 No alias protein kinase (LysM). LysM receptor kinase (NFR1/LYK3) 0.09 OrthoFinder output from all 47 species
LOC_Os02g09960.1 LOC_Os02g09960 protein kinase (LysM). LysM receptor kinase (NFR1/LYK3) 0.09 OrthoFinder output from all 47 species
LOC_Os02g45750.1 LOC_Os02g45750 Protein LYK5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g20337 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
MA_10436842g0010 No alias LysM domain receptor-like kinase 3 OS=Medicago... 0.04 OrthoFinder output from all 47 species
MA_646164g0010 No alias protein kinase (LysM) 0.03 OrthoFinder output from all 47 species
MA_892990g0010 No alias protein kinase (LysM). LysM receptor kinase (NFR5/NFP) 0.04 OrthoFinder output from all 47 species
MA_9476g0020 No alias protein kinase (LysM) 0.03 OrthoFinder output from all 47 species
Mp8g11780.1 No alias protein kinase (LysM) 0.03 OrthoFinder output from all 47 species
Msp_g06799 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Msp_g26548 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Nbi_g01271 No alias EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Pir_g48074 No alias LysM protein kinase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g089900.1.1 Solyc02g089900 protein kinase (LysM). LysM receptor kinase (NFR1/LYK3) 0.07 OrthoFinder output from all 47 species
Solyc09g083210.3.1 Solyc09g083210 protein kinase (LysM). LysM receptor kinase (NFR5/NFP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA Interproscan
BP GO:0006468 protein phosphorylation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 Typeorganic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001245 Ser-Thr/Tyr_kinase_cat_dom 415 652
IPR018392 LysM_dom 205 243
No external refs found!