Aliases : CHB4, SWI3C, ATSWI3C, Zm00001e024548
Description : component BAF255/170 of chromatin remodeling complex
Gene families : OG0000817 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000817_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00059p00072490 | CHB3, ATSWI3D,... | Chromatin organisation.chromatin remodeling... | 0.06 | OrthoFinder output from all 47 species | |
AT1G21700 | CHB4, SWI3C, ATSWI3C | SWITCH/sucrose nonfermenting 3C | 0.04 | OrthoFinder output from all 47 species | |
AT4G34430 | CHB3, ATSWI3D | DNA-binding family protein | 0.03 | OrthoFinder output from all 47 species | |
Adi_g055176 | SWI3A, CHB1, ATSWI3A | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.02 | OrthoFinder output from all 47 species | |
Adi_g108363 | SWI3A, CHB1, ATSWI3A | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.02 | OrthoFinder output from all 47 species | |
Aob_g16327 | CHB3, ATSWI3D | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g08555 | CHB4, SWI3C, ATSWI3C | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.03G090000.1 | CHB4, SWI3C,... | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.17G074300.1 | CHB3, ATSWI3D,... | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.18G048000.1 | SWI3A, CHB1,... | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.22G071000.1 | CHB3, ATSWI3D,... | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.28G011200.1 | CHB2, SWI3B,... | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g03107 | CHB3, ATSWI3D | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g09982 | CHB4, SWI3C, ATSWI3C | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01013428001 | CHB2, SWI3B, ATSWI3B | Chromatin organisation.chromatin remodeling... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os04g40420.1 | SWI3A, CHB1,... | component BAF255/170 of chromatin remodeling complex | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os12g07730.1 | CHB4, SWI3C,... | component BAF255/170 of chromatin remodeling complex | 0.04 | OrthoFinder output from all 47 species | |
Len_g28553 | SWI3A, CHB1, ATSWI3A | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g08236 | CHB3, ATSWI3D | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g08793 | CHB4, SWI3C, ATSWI3C | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.02 | OrthoFinder output from all 47 species | |
MA_10432371g0010 | CHB3, ATSWI3D | component BAF255/170 of chromatin remodeling complex | 0.04 | OrthoFinder output from all 47 species | |
MA_10432371g0020 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Mp8g15610.1 | SWI3A, CHB1, ATSWI3A | component BAF255/170 of chromatin remodeling complex | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g10605 | CHB3, ATSWI3D | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g01335 | CHB3, ATSWI3D | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g19959 | No alias | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g52721 | No alias | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.05 | OrthoFinder output from all 47 species | |
Solyc01g109510.3.1 | CHB3, ATSWI3D,... | component BAF255/170 of chromatin remodeling complex | 0.02 | OrthoFinder output from all 47 species | |
Solyc04g082760.3.1 | CHB2, SWI3B,... | component BAF255/170 of chromatin remodeling complex | 0.02 | OrthoFinder output from all 47 species | |
Solyc06g060120.3.1 | CHB4, SWI3C,... | component BAF255/170 of chromatin remodeling complex | 0.03 | OrthoFinder output from all 47 species | |
Spa_g06724 | SWI3A, CHB1, ATSWI3A | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g30642 | CHB3, ATSWI3D | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
MF | GO:0003714 | transcription corepressor activity | IEP | HCCA |
MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
CC | GO:0005669 | transcription factor TFIID complex | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
BP | GO:0006508 | proteolysis | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
MF | GO:0008238 | exopeptidase activity | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
MF | GO:0015631 | tubulin binding | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
MF | GO:0043015 | gamma-tubulin binding | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
MF | GO:0070008 | serine-type exopeptidase activity | IEP | HCCA |
BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
No external refs found! |