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  5. Zm00001e024119_P001

Zm00001e024119_P001 (Zm00001e024119)


Aliases : Zm00001e024119

Description : PAN domain-containing protein At5g03700 OS=Arabidopsis thaliana (sp|q9lzr8|y5370_arath : 242.0)


Gene families : OG0010647 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010647_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e024119_P001
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00203990 evm_27.TU.AmTr_v1... PAN domain-containing protein At5g03700 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AT5G03700 No alias D-mannose binding lectin protein with Apple-like... 0.12 OrthoFinder output from all 47 species
Aev_g04101 SD2-5 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Dac_g38518 SD2-5 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_08824 No alias PAN domain-containing protein At5g03700 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os02g32620.1 LOC_Os02g32620 PAN domain-containing protein At5g03700 OS=Arabidopsis... 0.1 OrthoFinder output from all 47 species
LOC_Os11g05240.1 LOC_Os11g05240 PAN domain-containing protein At5g03700 OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010016 No alias not classified & original description: CDS=1-1689 0.02 OrthoFinder output from all 47 species
Solyc09g009150.1.1 Solyc09g009150 PAN domain-containing protein At5g03700 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Zm00001e014708_P001 Zm00001e014708 PAN domain-containing protein At5g03700 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0048544 recognition of pollen IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000858 S_locus_glycoprot_dom 259 325
No external refs found!