Aliases : PUB44, SAUL1, ATPUB44, Zm00001e023512
Description : E3 ubiquitin ligase (PUB)
Gene families : OG0001077 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001077_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00006p00256300 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.06 | OrthoFinder output from all 47 species | |
AT1G76390 | No alias | ARM repeat superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
Adi_g017421 | No alias | E3 ubiquitin ligase *(SAUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g023614 | No alias | E3 ubiquitin ligase *(SAUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aob_g41953 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.03G039300.1 | PUB44, SAUL1,... | E3 ubiquitin ligase *(SAUL) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.14G057700.1 | PUB44, SAUL1,... | E3 ubiquitin ligase *(SAUL) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g10711 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Dac_g13175 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g07733 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dde_g02338 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g06205 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01001115001 | PUB8, B80 | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01010123001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01013395001 | PUB44, SAUL1, ATPUB44 | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01024723001 | PUB44, SAUL1, ATPUB44 | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os03g45420.1 | PUB44, SAUL1,... | E3 ubiquitin ligase (PUB) | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os06g16410.1 | LOC_Os06g16410 | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os12g17880.1 | PUB44, SAUL1,... | E3 ubiquitin ligase (PUB) | 0.07 | OrthoFinder output from all 47 species | |
Lfl_g03394 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g03427 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
MA_10427526g0010 | No alias | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species | |
Msp_g13315 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g28889 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g06462 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g16850 | No alias | E3 ubiquitin ligase *(SAUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0008.g004062 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: CDS=156-2609 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0013.g005833 | No alias | not classified & original description: CDS=1-537 | 0.02 | OrthoFinder output from all 47 species | |
Sam_g26587 | No alias | E3 ubiquitin ligase *(SAUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc04g082570.3.1 | PUB44, SAUL1,... | E3 ubiquitin ligase (PUB) | 0.05 | OrthoFinder output from all 47 species | |
Tin_g02165 | No alias | E3 ubiquiTin ligase *(SAUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g42066 | PUB44, SAUL1, ATPUB44 | E3 ubiquiTin ligase *(SAUL) & original description: none | 0.01 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004842 | ubiquitin-protein transferase activity | IEA | Interproscan |
MF | GO:0005515 | protein binding | IEA | Interproscan |
BP | GO:0016567 | protein ubiquitination | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
MF | GO:0004601 | peroxidase activity | IEP | HCCA |
MF | GO:0005509 | calcium ion binding | IEP | HCCA |
BP | GO:0006950 | response to stress | IEP | HCCA |
BP | GO:0006979 | response to oxidative stress | IEP | HCCA |
MF | GO:0008171 | O-methyltransferase activity | IEP | HCCA |
MF | GO:0016209 | antioxidant activity | IEP | HCCA |
MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | HCCA |
MF | GO:0020037 | heme binding | IEP | HCCA |
MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
BP | GO:0050896 | response to stimulus | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No external refs found! |