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  5. Zm00001e022823_P002

Zm00001e022823_P002 (SLY1, Zm00001e022823)


Aliases : SLY1, Zm00001e022823

Description : SLY-type gibberellin signal transducer. component F-box of SCF E3 ubiquitin ligase complex. component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0001049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001049_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e022823_P002
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00031290 evm_27.TU.AmTr_v1... F-box protein At2g27310 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00025p00055630 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00114p00120290 evm_27.TU.AmTr_v1... Probable F-box protein At2g36090 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AT3G44326 No alias F-box family protein 0.02 OrthoFinder output from all 47 species
AT5G48170 SLY2 F-box family protein 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g010412 SLY1 not classified & original description: CDS=1-828 0.03 OrthoFinder output from all 47 species
Ehy_g32029 SLY1 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.02 OrthoFinder output from all 47 species
MA_146085g0010 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.03 OrthoFinder output from all 47 species
MA_152693g0010 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.03 OrthoFinder output from all 47 species
Mp5g06150.1 No alias SLY-type gibberellin signal transducer. component F-box... 0.02 OrthoFinder output from all 47 species
Pir_g64791 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Pnu_g12380 SLY1 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Pnu_g17370 SLY1 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.02 OrthoFinder output from all 47 species
Zm00001e040837_P001 Zm00001e040837 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 93 132
No external refs found!