Zm00001e022379_P002 (ATHB1, ATHB-1, HAT5,...)

Aliases : ATHB1, ATHB-1, HAT5, HD-ZIP-1, HB-1, Zm00001e022379

Description : transcription factor (HD-ZIP I/II)

Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e022379_P002

Target	Alias	Description	ECC score	Gene Family Method
AT3G01220	ATHB20, HB20	homeobox protein 20	0.03	OrthoFinder output from all 47 species
AT3G01470	ATHB1, ATHB-1,...	homeobox 1	0.04	OrthoFinder output from all 47 species
AT4G36740	ATHB40, HB40, HB-5	homeobox protein 40	0.03	OrthoFinder output from all 47 species
AT4G40060	ATHB16, HB16, ATHB-16	homeobox protein 16	0.02	OrthoFinder output from all 47 species
AT5G03790	HB51, ATHB51, LMI1	homeobox 51	0.02	OrthoFinder output from all 47 species
Aev_g05414	ATHB16, HB16, ATHB-16	regulatory protein *(LMI1) of floral meristem identity...	0.03	OrthoFinder output from all 47 species
Ala_g10993	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ala_g12773	No alias	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ala_g31935	ATHB1, ATHB-1,...	regulatory protein *(LMI1) of floral meristem identity...	0.04	OrthoFinder output from all 47 species
Als_g28925	ATHB40, HB40, HB-5	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aop_g15529	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene38379.t1	HB6, ATHB6,...	regulatory protein *(LMI1) of floral meristem identity...	0.02	OrthoFinder output from all 47 species
Aspi01Gene38597.t1	ATHB3, HB-3,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene42458.t1	ATHB21, HB21,...	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Dac_g21371	ATHB21, HB21, HB-2	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Dcu_g18383	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ehy_g23915	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
GSVIVT01008065001	ATHB1, ATHB-1,...	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
Gb_07295	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Gb_20878	ATHB3, HB-3, ATHB-3, HAT7	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
LOC_Os02g49700.1	ATHB1, ATHB-1,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
LOC_Os03g08960.1	ATHB5, ATHB-5,...	transcription factor (HD-ZIP I/II)	0.02	OrthoFinder output from all 47 species
LOC_Os03g10210.1	ATHB40, HB40,...	transcription factor (HD-ZIP I/II)	0.02	OrthoFinder output from all 47 species
LOC_Os08g32080.1	ATHB1, ATHB-1,...	transcription factor (HD-ZIP I/II)	0.06	OrthoFinder output from all 47 species
LOC_Os08g32085.1	ATHB1, ATHB-1,...	transcription factor (HD-ZIP I/II)	0.06	OrthoFinder output from all 47 species
LOC_Os09g29460.1	ATHB5, ATHB-5,...	transcription factor (HD-ZIP I/II)	0.02	OrthoFinder output from all 47 species
LOC_Os09g35910.1	HB-7, ATHB-7,...	transcription factor (HD-ZIP I/II)	0.05	OrthoFinder output from all 47 species
Len_g10023	ATHB13	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Lfl_g11869	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Lfl_g23117	ATHB13	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
MA_128g0010	ATHB13	transcription factor (HD-ZIP I/II)	0.04	OrthoFinder output from all 47 species
MA_238039g0010	ATHB13	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
MA_60543g0010	ATHB3, HB-3, ATHB-3, HAT7	transcription factor (HD-ZIP I/II)	0.04	OrthoFinder output from all 47 species
Msp_g06076	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Msp_g13239	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Nbi_g29745	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ore_g29369	HB51, ATHB51, LMI1	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ore_g29472	ATHB1, ATHB-1,...	regulatory protein *(LMI1) of floral meristem identity...	0.02	OrthoFinder output from all 47 species
Ore_g34076	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ore_g41934	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ore_g45630	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g22217	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pnu_g07961	ATHB16, HB16, ATHB-16	regulatory protein *(LMI1) of floral meristem identity...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022579	ATHB21, HB21, HB-2	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Solyc01g096320.3.1	HB-12, ATHB-12,...	transcription factor (HD-ZIP I/II)	0.06	OrthoFinder output from all 47 species
Solyc02g086930.4.1	ATHB1, ATHB-1,...	transcription factor (HD-ZIP I/II)	0.05	OrthoFinder output from all 47 species
Solyc02g087840.3.1	ATHB3, HB-3,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Solyc05g051460.3.1	ATHB16, HB16,...	transcription factor (HD-ZIP I/II)	0.04	OrthoFinder output from all 47 species
Solyc07g062790.1.1	ATHB52, HB52,...	transcription factor (HD-ZIP I/II)	0.04	OrthoFinder output from all 47 species
Spa_g02959	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g11388	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Tin_g09467	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Zm00001e010004_P002	ATHB16, HB16,...	transcription factor (HD-ZIP I/II)	0.02	OrthoFinder output from all 47 species
Zm00001e010637_P001	ATHB40, HB40,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004180	carboxypeptidase activity	IEP	HCCA
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
MF	GO:0043531	ADP binding	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
MF	GO:0070008	serine-type exopeptidase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	77	130
IPR003106	Leu_zip_homeo	132	174

External Links

No external refs found!

Zm00001e022379_P002 (ATHB1, ATHB-1, HAT5,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation