Aliases : Zm00001e022076
Description : hydroxy-tetrahydrodihydrodipicolinate reductase
Gene families : OG0006077 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006077_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e022076_P001 | |
Cluster | HCCA: Cluster_59 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT2G44040 | No alias | Dihydrodipicolinate reductase, bacterial/plant | 0.02 | OrthoFinder output from all 47 species | |
Ceric.02G083200.1 | Ceric.02G083200 | hydroxy-tetrahydrodihydrodipicolinate reductase &... | 0.04 | OrthoFinder output from all 47 species | |
Cre14.g627850 | No alias | Amino acid metabolism.biosynthesis.aspartate... | 0.05 | OrthoFinder output from all 47 species | |
Dac_g29031 | No alias | hydroxy-tetrahydrodihydrodipicolinate reductase &... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g00976 | No alias | hydroxy-tetrahydrodihydrodipicolinate reductase &... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g06640 | No alias | hydroxy-tetrahydrodihydrodipicolinate reductase &... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g24020.1 | LOC_Os02g24020 | hydroxy-tetrahydrodihydrodipicolinate reductase | 0.04 | OrthoFinder output from all 47 species | |
Len_g13470 | No alias | hydroxy-tetrahydrodihydrodipicolinate reductase &... | 0.02 | OrthoFinder output from all 47 species | |
MA_122229g0010 | No alias | hydroxy-tetrahydrodihydrodipicolinate reductase | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g098380.4.1 | Solyc01g098380 | hydroxy-tetrahydrodihydrodipicolinate reductase | 0.04 | OrthoFinder output from all 47 species | |
Tin_g05994 | No alias | hydroxy-tetrahydrodihydrodipicolinate reductase &... | 0.06 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008839 | 4-hydroxy-tetrahydrodipicolinate reductase | IEA | Interproscan |
BP | GO:0009089 | lysine biosynthetic process via diaminopimelate | IEA | Interproscan |
BP | GO:0055114 | obsolete oxidation-reduction process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000049 | tRNA binding | IEP | HCCA |
BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0004809 | tRNA (guanine-N2-)-methyltransferase activity | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
BP | GO:0008033 | tRNA processing | IEP | HCCA |
MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
MF | GO:0008175 | tRNA methyltransferase activity | IEP | HCCA |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
MF | GO:0009982 | pseudouridine synthase activity | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | HCCA |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
CC | GO:0030684 | preribosome | IEP | HCCA |
CC | GO:0032040 | small-subunit processome | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No external refs found! |