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  5. Zm00001e021910_P001

Zm00001e021910_P001 (ATISA1, ISA1, Zm00001e021910)


Aliases : ATISA1, ISA1, Zm00001e021910

Description : starch debranching enzyme. starch-debranching isoamylase-type enzyme


Gene families : OG0001139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001139_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e021910_P001
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
AT1G03310 DBE1, ATISA2, BE2, ISA2 debranching enzyme 1 0.04 OrthoFinder output from all 47 species
AT4G09020 ATISA3, ISA3 isoamylase 3 0.04 OrthoFinder output from all 47 species
Adi_g021373 ATISA3, ISA3 starch-debranching isoamylase *(ISA3) & original... 0.02 OrthoFinder output from all 47 species
Adi_g074287 DBE1, ATISA2, BE2, ISA2 component *(ISA2) of ISA1-ISA2 isoamylase heterodimer &... 0.03 OrthoFinder output from all 47 species
Cre03.g155001 ATISA1, ISA1 Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
Cre03.g207713 ATISA3, ISA3 Carbohydrate metabolism.starch... 0.03 OrthoFinder output from all 47 species
LOC_Os05g32710.1 DBE1, ATISA2,... starch debranching enzyme. starch-debranching... 0.06 OrthoFinder output from all 47 species
LOC_Os08g40930.1 ATISA1, ISA1,... starch debranching enzyme. starch-debranching... 0.09 OrthoFinder output from all 47 species
Msp_g31327 ATISA3, ISA3 starch-debranching isoamylase *(ISA3) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g06253 ATISA3, ISA3 starch-debranching isoamylase *(ISA3) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g28992 ATISA1, ISA1 component *(ISA1) of ISA1-ISA2 isoamylase heterodimer &... 0.02 OrthoFinder output from all 47 species
Ore_g33891 DBE1, ATISA2, BE2, ISA2 component *(ISA2) of ISA1-ISA2 isoamylase heterodimer &... 0.02 OrthoFinder output from all 47 species
Solyc06g009220.4.1 ATISA3, ISA3,... starch debranching enzyme. starch-debranching... 0.03 OrthoFinder output from all 47 species
Solyc07g014590.4.1 ATISA1, ISA1,... starch debranching enzyme. starch-debranching... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR004193 Glyco_hydro_13_N 87 182
IPR006047 Glyco_hydro_13_cat_dom 252 353
No external refs found!