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Aliases : SEU, Zm00001e021381
Description : Transcriptional corepressor SEUSS OS=Arabidopsis thaliana (sp|q8w234|seuss_arath : 400.0)
Gene families : OG0000747 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000747_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G25515 | SLK3 | SEUSS-like 3 | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g016540 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g042651 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g07332 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g46858 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g02698 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.06 | OrthoFinder output from all 47 species | |
| Als_g11136 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g21250 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene39070.t1 | SEU, Aspi01Gene39070 | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene51627.t1 | SEU, Aspi01Gene51627 | adapter component *(SEU/SLK) of transcriptional... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene65882.t1 | SEU, Aspi01Gene65882 | adapter component *(SEU/SLK) of transcriptional... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g75940 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.03G041400.1 | SEU, Ceric.03G041400 | adapter component *(SEU/SLK) of transcriptional... | 0.08 | OrthoFinder output from all 47 species | |
| Dac_g22707 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g06488 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g00969 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g06324 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g23719 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01010013001 | SEU | Transcriptional corepressor SEUSS OS=Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01010616001 | SLK2 | Probable transcriptional regulator SLK2 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| Gb_04218 | SEU | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_04695 | SLK2 | Probable transcriptional regulator SLK2 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_27183 | SEU | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os11g10060.1 | SEU, LOC_Os11g10060 | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g10070.1 | SEU, LOC_Os11g10070 | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g05463 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g26300 | SLK2 | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g41806 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.05 | OrthoFinder output from all 47 species | |
| Len_g54497 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| MA_12796g0010 | SEU | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species | |
| MA_33392g0010 | SLK2 | Probable transcriptional regulator SLK2 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Mp8g17020.1 | SEU | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g38880 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g47122 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g15709 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g42762 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g13626 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g04706 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0009.g004551 | SLK2 | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0114.g020924 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g51729 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo409769 | SEU | Transcriptional corepressor SEUSS OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g059750.3.1 | SEU, Solyc06g059750 | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc06g059760.3.1 | SEU, Solyc06g059760 | Transcriptional corepressor SEUSS OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g52444 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g54952 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g08157 | SEU | adapter component *(SEU/SLK) of transcriptional... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | HCCA |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006401 | RNA catabolic process | IEP | HCCA |
| BP | GO:0006402 | mRNA catabolic process | IEP | HCCA |
| BP | GO:0009056 | catabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
| BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
| BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR029005 | LIM-bd/SEUSS | 376 | 629 |
| No external refs found! |