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  5. Zm00001e021051_P001

Zm00001e021051_P001 (Zm00001e021051)


Aliases : Zm00001e021051

Description : Probable polygalacturonase OS=Vitis vinifera (sp|a7pzl3|pglr_vitvi : 398.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 50.4)


Gene families : OG0000312 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000312_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e021051_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00118570 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 OrthoFinder output from all 47 species
AT2G23900 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G23500 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
Ala_g07714 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g11539 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g20477 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g13382 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.37G027000.1 Ceric.37G027000 EC_3.2 glycosylase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.38G048100.1 Ceric.38G048100 EC_3.2 glycosylase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.39G027100.1 Ceric.39G027100 EC_3.2 glycosylase & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g29621 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39381 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g05796 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08388 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09567 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026985001 No alias Probable polygalacturonase OS=Vitis vinifera 0.02 OrthoFinder output from all 47 species
GSVIVT01028860001 No alias Probable polygalacturonase OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
Gb_06212 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
LOC_Os03g03350.1 LOC_Os03g03350 Probable polygalacturonase OS=Vitis vinifera... 0.05 OrthoFinder output from all 47 species
LOC_Os09g26800.1 LOC_Os09g26800 Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
LOC_Os11g43750.1 LOC_Os11g43750 Probable polygalacturonase OS=Vitis vinifera... 0.07 OrthoFinder output from all 47 species
Len_g07468 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23995 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g38310 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g40756 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430135g0020 No alias Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
MA_12554g0020 No alias Probable polygalacturonase OS=Vitis vinifera... 0.04 OrthoFinder output from all 47 species
Nbi_g06175 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g18475 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18141 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g61919 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000166 No alias EC_3.2 glycosylase & original description: CDS=1-1656 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017352 No alias EC_3.2 glycosylase & original description: CDS=215-1831 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0125.g021678 No alias EC_3.2 glycosylase & original description: CDS=1-1605 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0194.g025415 No alias EC_3.2 glycosylase & original description: CDS=1-1449 0.03 OrthoFinder output from all 47 species
Solyc03g007950.3.1 Solyc03g007950 Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
Solyc07g042160.3.1 Solyc07g042160 Probable polygalacturonase OS=Vitis vinifera... 0.04 OrthoFinder output from all 47 species
Solyc08g081480.3.1 Solyc08g081480 Probable polygalacturonase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
Spa_g14594 No alias EC_3.2 glycosylase & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g39268 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g39269 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g51754 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09287 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e026646_P002 Zm00001e026646 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 139 422
No external refs found!