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  5. Zm00001e020488_P001

Zm00001e020488_P001 (Zm00001e020488)


Aliases : Zm00001e020488

Description : IQ domain-containing protein IQM4 OS=Arabidopsis thaliana (sp|o64851|iqm4_arath : 458.0)


Gene families : OG0002150 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002150_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e020488_P001
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00135420 evm_27.TU.AmTr_v1... IQ domain-containing protein IQM4 OS=Arabidopsis thaliana 0.11 OrthoFinder output from all 47 species
AT2G26190 No alias calmodulin-binding family protein 0.07 OrthoFinder output from all 47 species
AT3G13600 No alias calmodulin-binding family protein 0.04 OrthoFinder output from all 47 species
AT4G33050 EDA39 calmodulin-binding family protein 0.06 OrthoFinder output from all 47 species
AT5G57010 No alias calmodulin-binding family protein 0.06 OrthoFinder output from all 47 species
Aop_g08936 EDA39 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0290.g063300 No alias not classified & original description: CDS=114-1427 0.03 OrthoFinder output from all 47 species
Dde_g09588 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015178001 No alias IQ domain-containing protein IQM4 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01017097001 No alias IQ domain-containing protein IQM1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01035381001 EDA39 IQ domain-containing protein IQM1 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
Gb_01832 No alias IQ domain-containing protein IQM6 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_10224 No alias IQ domain-containing protein IQM2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os01g38980.1 EDA39, LOC_Os01g38980 IQ domain-containing protein IQM4 OS=Arabidopsis... 0.11 OrthoFinder output from all 47 species
LOC_Os03g25760.1 LOC_Os03g25760 IQ domain-containing protein IQM2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os05g10840.2 LOC_Os05g10840 IQ domain-containing protein IQM4 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
LOC_Os07g43970.1 LOC_Os07g43970 IQ domain-containing protein IQM2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_50509g0010 No alias IQ domain-containing protein IQM6 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
MA_52703g0010 No alias IQ domain-containing protein IQM3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_63468g0010 No alias IQ domain-containing protein IQM2 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Pir_g35617 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g06567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g005800.3.1 Solyc01g005800 IQ domain-containing protein IQM2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc07g040710.3.1 Solyc07g040710 IQ domain-containing protein IQM1 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Solyc12g008960.2.1 Solyc12g008960 IQ domain-containing protein IQM1 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Zm00001e038131_P002 Zm00001e038131 IQ domain-containing protein IQM2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!