1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e020396_P001

Zm00001e020396_P001 (Zm00001e020396)


Aliases : Zm00001e020396

Description : no hits & (original description: none)


Gene families : OG0002719 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002719_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e020396_P001

Target Alias Description ECC score Gene Family Method Actions
Adi_g076695 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g15247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19097 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g11705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g23055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01024823001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os12g05920.1 LOC_Os12g05920 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g24505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10426020g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g42721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06792 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37630 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g11567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23522 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g23730 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020564 No alias not classified & original description: CDS=1-2943 0.03 OrthoFinder output from all 47 species
Sam_g40488 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g031650.3.1 Solyc09g031650 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
MF GO:0017069 snRNA binding IEP HCCA
MF GO:0017070 U6 snRNA binding IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0030623 U5 snRNA binding IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!