Aliases : Zm00001e019791
Description : protein factor (NERD) of non-canonical RdDM pathway
Gene families : OG0001217 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001217_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00027p00244500 | evm_27.TU.AmTr_v1... | Zinc finger CCCH domain-containing protein 19... | 0.04 | OrthoFinder output from all 47 species | |
AT2G16485 | No alias | nucleic acid binding;zinc ion binding;DNA binding | 0.07 | OrthoFinder output from all 47 species | |
AT3G51120 | No alias | DNA binding;zinc ion binding;nucleic acid... | 0.07 | OrthoFinder output from all 47 species | |
AT5G63700 | No alias | zinc ion binding;DNA binding | 0.02 | OrthoFinder output from all 47 species | |
Adi_g026023 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Adi_g077164 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g106014 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g107366 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.02 | OrthoFinder output from all 47 species | |
Ala_g06673 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.02 | OrthoFinder output from all 47 species | |
Ala_g35223 | No alias | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
Als_g03906 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.02 | OrthoFinder output from all 47 species | |
Aob_g19106 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.05 | OrthoFinder output from all 47 species | |
Aop_g08568 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g13646 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.05 | OrthoFinder output from all 47 species | |
Azfi_s0288.g063262 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.02 | OrthoFinder output from all 47 species | |
Cba_g23748 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g74669 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.03G088800.1 | Ceric.03G088800 | not classified & original description: pacid=50572957... | 0.11 | OrthoFinder output from all 47 species | |
Ceric.09G099900.1 | Ceric.09G099900 | protein factor (NERD) of non-canonical RdDM pathway &... | 0.06 | OrthoFinder output from all 47 species | |
Dac_g09152 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g02022 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.09 | OrthoFinder output from all 47 species | |
Dde_g21523 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g05103 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.08 | OrthoFinder output from all 47 species | |
Ehy_g26663 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01024181001 | No alias | Zinc finger CCCH domain-containing protein 19... | 0.05 | OrthoFinder output from all 47 species | |
Gb_13136 | No alias | protein factor (NERD) of non-canonical RdDM pathway | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os05g34780.1 | LOC_Os05g34780 | Zinc finger CCCH domain-containing protein 44... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os09g36090.1 | LOC_Os09g36090 | protein factor (NERD) of non-canonical RdDM pathway | 0.11 | OrthoFinder output from all 47 species | |
LOC_Os10g36810.1 | LOC_Os10g36810 | protein factor (NERD) of non-canonical RdDM pathway | 0.04 | OrthoFinder output from all 47 species | |
Len_g13930 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g05726 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g06273 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.07 | OrthoFinder output from all 47 species | |
Lfl_g35904 | No alias | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
MA_116694g0010 | No alias | Zinc finger CCCH domain-containing protein 19... | 0.06 | OrthoFinder output from all 47 species | |
Mp4g08690.1 | No alias | protein factor (NERD) of non-canonical RdDM pathway | 0.04 | OrthoFinder output from all 47 species | |
Msp_g38424 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g14762 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.07 | OrthoFinder output from all 47 species | |
Ore_g10283 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Ore_g45316 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.02 | OrthoFinder output from all 47 species | |
Ore_g45456 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g06499 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g12625 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.08 | OrthoFinder output from all 47 species | |
Ppi_g35752 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Ppi_g49417 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g58382 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.06 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0078.g017691 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.05 | OrthoFinder output from all 47 species | |
Sam_g52359 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.06 | OrthoFinder output from all 47 species | |
Solyc02g084510.3.1 | Solyc02g084510 | Zinc finger CCCH domain-containing protein 44... | 0.06 | OrthoFinder output from all 47 species | |
Solyc03g033630.3.1 | Solyc03g033630 | Zinc finger CCCH domain-containing protein 44... | 0.06 | OrthoFinder output from all 47 species | |
Solyc11g062220.2.1 | Solyc11g062220 | Zinc finger CCCH domain-containing protein 19... | 0.05 | OrthoFinder output from all 47 species | |
Spa_g15744 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g30973 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.06 | OrthoFinder output from all 47 species | |
Tin_g09943 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.09 | OrthoFinder output from all 47 species | |
Tin_g43997 | No alias | protein factor (NERD) of non-canonical RdDM pathway &... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0005515 | protein binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
CC | GO:0005694 | chromosome | IEP | HCCA |
BP | GO:0006354 | DNA-templated transcription elongation | IEP | HCCA |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
BP | GO:0006368 | transcription elongation by RNA polymerase II | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006476 | protein deacetylation | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
CC | GO:0008023 | transcription elongation factor complex | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
BP | GO:0016570 | histone modification | IEP | HCCA |
BP | GO:0016575 | histone deacetylation | IEP | HCCA |
CC | GO:0016592 | mediator complex | IEP | HCCA |
CC | GO:0016593 | Cdc73/Paf1 complex | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0035601 | protein deacylation | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0051276 | chromosome organization | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
BP | GO:0098732 | macromolecule deacylation | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
No external refs found! |