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  5. Zm00001e019541_P001

Zm00001e019541_P001 (EDL3, Zm00001e019541)


Aliases : EDL3, Zm00001e019541

Description : component EDL of SCF E3 ubiquitin ligase complex


Gene families : OG0002377 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002377_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e019541_P001
Cluster HCCA: Cluster_271

Target Alias Description ECC score Gene Family Method Actions
AT3G63060 EDL3 EID1-like 3 0.04 OrthoFinder output from all 47 species
Aev_g08506 EDL2 substrate adaptor EDL of SCF E3 ubiquitin ligase complex... 0.02 OrthoFinder output from all 47 species
Ala_g09464 EDL2 substrate adaptor EDL of SCF E3 ubiquitin ligase complex... 0.03 OrthoFinder output from all 47 species
Cba_g03805 EDL2 substrate adaptor EDL of SCF E3 ubiquitin ligase complex... 0.03 OrthoFinder output from all 47 species
Dcu_g01928 EDL2 substrate adaptor EDL of SCF E3 ubiquitin ligase complex... 0.03 OrthoFinder output from all 47 species
LOC_Os05g41490.1 EDL3, LOC_Os05g41490 component EDL of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
Lfl_g04726 EDL2 substrate adaptor EDL of SCF E3 ubiquitin ligase complex... 0.02 OrthoFinder output from all 47 species
Msp_g06818 EDL2 substrate adaptor EDL of SCF E3 ubiquitin ligase complex... 0.03 OrthoFinder output from all 47 species
Ppi_g35879 EDL2 substrate adaptor EDL of SCF E3 ubiquitin ligase complex... 0.02 OrthoFinder output from all 47 species
Solyc06g084320.1.1 EDL3, Solyc06g084320 component EDL of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
Zm00001e032015_P001 EDL3, Zm00001e032015 component EDL of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 50 89
No external refs found!