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  5. Zm00001e018463_P002

Zm00001e018463_P002 (LHW, Zm00001e018463)


Aliases : LHW, Zm00001e018463

Description : Transcription factor LHW OS=Arabidopsis thaliana (sp|q9xin0|lhw_arath : 296.0)


Gene families : OG0001070 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001070_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e018463_P002

Target Alias Description ECC score Gene Family Method Actions
Adi_g055836 CPUORF7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g082190 EMB1444 LHW/LHL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g104851 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g07333 LHW LHW/LHL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61379 LHW LHW/LHL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13571 LHW LHW/LHL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07765 LHW LHW/LHL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g22156 LHW LHW/LHL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.24G018600.1 LHW, Ceric.24G018600 LHW/LHL-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g11990 EMB1444 LHW/LHL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01037572001 LHW Transcription factor LHW OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_14057 LHW Transcription factor LHW OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os11g06010.1 LHW, LOC_Os11g06010 Transcription factor LHW OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Lfl_g06748 LHW LHW/LHL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16821 EMB1444 LHW/LHL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03201 LHW LHW/LHL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12232 LHW LHW/LHL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000496 CPUORF7 LHW/LHL-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0179.g024761 EMB1444 LHW/LHL-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sam_g03520 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g07640 LHW LHW/LHL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29077 LHW LHW/LHL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009089_P003 LHW, Zm00001e009089 Transcription factor LHW OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006072 glycerol-3-phosphate metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
CC GO:0031248 protein acetyltransferase complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0046168 glycerol-3-phosphate catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0052646 alditol phosphate metabolic process IEP HCCA
CC GO:0070461 SAGA-type complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
CC GO:1902493 acetyltransferase complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR025610 MYC/MYB_N 6 156
No external refs found!