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  5. Zm00001e017595_P001

Zm00001e017595_P001 (AMSH1, Zm00001e017595)


Aliases : AMSH1, Zm00001e017595

Description : deubiquitinase (AMSH)


Gene families : OG0001591 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001591_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e017595_P001
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
Ala_g23492 AMSH1 deubiquitinase *(AMSH) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15611 AMSH1 deubiquitinase *(AMSH) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57402 AMSH1 deubiquitinase *(AMSH) & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g25527 AMSH1 deubiquitinase *(AMSH) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16647.t1 AMSH1, Aspi01Gene16647 deubiquitinase *(AMSH) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0212.g058161 AMSH1 deubiquitinase *(AMSH) & original description: CDS=85-1446 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000248.12 AMSH2 Vesicle trafficking.endomembrane trafficking.protein... 0.02 OrthoFinder output from all 47 species
Cre01.g024300 AMSH1 Vesicle trafficking.endomembrane trafficking.protein... 0.02 OrthoFinder output from all 47 species
Dcu_g02765 AMSH1 deubiquitinase *(AMSH) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g23640.1 AMSH1, LOC_Os01g23640 deubiquitinase (AMSH) 0.07 OrthoFinder output from all 47 species
LOC_Os01g31470.1 AMSH1, LOC_Os01g31470 deubiquitinase (AMSH) 0.03 OrthoFinder output from all 47 species
Len_g00586 AMSH1 deubiquitinase *(AMSH) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g09618 AMSH1 deubiquitinase *(AMSH) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g01104 AMSH1 deubiquitinase *(AMSH) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05070 AMSH1 deubiquitinase *(AMSH) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16877 AMSH1 deubiquitinase *(AMSH) & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c6_16700V3.1 AMSH1, Pp3c6_16700 associated molecule with the SH3 domain of STAM 1 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007734 AMSH1 deubiquitinase *(AMSH) & original description: CDS=166-1617 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0139.g022666 AMSH1 deubiquitinase *(AMSH) & original description: CDS=122-1471 0.02 OrthoFinder output from all 47 species
Spa_g08474 AMSH1 deubiquitinase *(AMSH) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
MF GO:1990380 K48-linked deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR015063 USP8_dimer 20 101
IPR000555 JAMM/MPN+_dom 329 435
No external refs found!