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Aliases : Zm00001e016650
Description : no hits & (original description: none)
Gene families : OG0004400 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004400_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e016650_P001 | |
| Cluster | HCCA: Cluster_183 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00271990 | evm_27.TU.AmTr_v1... | No description available | 0.05 | OrthoFinder output from all 47 species | |
| AT4G30990 | No alias | ARM repeat superfamily protein | 0.12 | OrthoFinder output from all 47 species | |
| Adi_g012035 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g15020 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g14333 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g18323 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene21756.t1 | Aspi01Gene21756 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0105.g044994 | No alias | not classified & original description: CDS=23-8209 | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.31G030600.1 | Ceric.31G030600 | not classified & original description: pacid=50574249... | 0.05 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000137.1 | No alias | No description available | 0.07 | OrthoFinder output from all 47 species | |
| Cre10.g461000 | No alias | No description available | 0.08 | OrthoFinder output from all 47 species | |
| Dcu_g13106 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g03006 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g17424 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01021009001 | No alias | No description available | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os01g40250.1 | LOC_Os01g40250 | no hits & (original description: none) | 0.2 | OrthoFinder output from all 47 species | |
| Lfl_g13195 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_10428483g0010 | No alias | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| MA_131618g0010 | No alias | no hits & (original description: none) | 0.11 | OrthoFinder output from all 47 species | |
| MA_51913g0010 | No alias | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Mp4g16100.1 | No alias | no hits & (original description: none) | 0.1 | OrthoFinder output from all 47 species | |
| Sam_g17460 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Smo444016 | No alias | No description available | 0.09 | OrthoFinder output from all 47 species | |
| Solyc09g092240.3.1 | Solyc09g092240 | no hits & (original description: none) | 0.1 | OrthoFinder output from all 47 species | |
| Tin_g27076 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005643 | nuclear pore | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006606 | protein import into nucleus | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| MF | GO:0017069 | snRNA binding | IEP | HCCA |
| MF | GO:0017070 | U6 snRNA binding | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0030623 | U5 snRNA binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034504 | protein localization to nucleus | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0051169 | nuclear transport | IEP | HCCA |
| BP | GO:0051170 | import into nucleus | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011430 | UTP20_N | 884 | 1518 |
| No external refs found! |